Erwinia amylovora CFBP1430: EAMY_2003
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Entry
EAMY_2003 CDS
T01197
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eam
Erwinia amylovora CFBP1430
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eam03016
]
EAMY_2003 (rnd)
Enzymes [BR:
eam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EAMY_2003 (rnd)
Transfer RNA biogenesis [BR:
eam03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EAMY_2003 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
CBA20953
UniProt:
D4I416
LinkDB
All DBs
Position
complement(2062039..2063148)
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AA seq
369 aa
AA seq
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MITTNAALCEVCQRARQVPALALDTEFVRTRTYYPRLGLIQLYDGETICLIDPLPITDWT
PFRDLLLDQQVIKYLHAGSEDLEVFQHEFGVLPQPMIDTQILAAFSGRPLSCGFATIVES
FTGIVLDKSESRTDWLARPLSEKQCRYAAADVFYLLPIAEKLVAETEAAGQMAAALDECR
LLCQRRTSVLKPQEAYREIANAWQLRPRQLAALRQMAAWRLEVAREKDMAVNFVVREENL
WKAARFMPGSLAELDHLGLSGQEIRFHGKALLAMVAEANALEEEQLPPPVANLMDYPHYK
QVFKSLKGLVAETAERHGVSQELLASRRQINQLLSCHWQLKPQQGKPELIDGWRGVLLDA
GIAEILAAH
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccactaacgcagcgctgtgcgaagtgtgccagcgcgcccgccaggttccggcg
ctggcgctggacacagaatttgttcgtacccgcacttactaccctcgtctgggattaata
cagctgtacgatggtgaaactatctgcctgattgatccactgcccattaccgactggact
ccattcagagatctgctgttggaccagcaggtcataaaatacctccatgcagggagcgag
gatctggaggtttttcagcatgaatttggcgtgctgccgcagccaatgatcgatacgcag
atcctggcggcgttcagtggccgtccgttatcatgcggttttgccactatcgttgaatcc
tttaccggcatcgtactggataaaagtgaatcgcgcaccgactggctggcgcggccattg
agtgaaaagcagtgccggtatgcggctgccgatgtgttctatttactgcccattgccgaa
aagctggtagccgaaaccgaagctgcaggccagatggctgctgcgcttgacgagtgccgt
ttactttgccagcgccgcaccagcgtactgaaaccccaagaagcctaccgggaaattgcc
aatgcctggcagttacgcccacgccagctggcggcattgcggcagatggccgcatggcga
ctggaagtagcgcgtgaaaaagacatggcggttaactttgtcgttcgtgaagagaatctg
tggaaggctgcccgctttatgcccggatccctggcagagctggatcatttagggttatca
ggtcaggagatccgtttccacggtaaggcgctgttggcaatggttgccgaggcaaatgcg
ttggaggaggagcagttaccgccaccggtagccaacctcatggattacccgcattataag
caggtatttaagagtctgaaagggctggtggccgaaacggcagagcggcatggcgtcagt
caggagctgttggcatcacggcgtcagataaatcagctgttaagctgccactggcaactc
aaacctcagcaggggaaacctgaactgattgacggctggcgtggcgttctgttagatgca
ggtatcgccgagatcctcgctgcacactga
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