Erwinia amylovora CFBP1430: EAMY_2004
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Entry
EAMY_2004 CDS
T01197
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
eam
Erwinia amylovora CFBP1430
Pathway
eam00061
Fatty acid biosynthesis
eam00071
Fatty acid degradation
eam01100
Metabolic pathways
eam01212
Fatty acid metabolism
eam02024
Quorum sensing
eam04146
Peroxisome
Module
eam_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EAMY_2004 (fadD1)
00071 Fatty acid degradation
EAMY_2004 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EAMY_2004 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
EAMY_2004 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
eam01004
]
EAMY_2004 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eam04147
]
EAMY_2004 (fadD1)
Enzymes [BR:
eam01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EAMY_2004 (fadD1)
Lipid biosynthesis proteins [BR:
eam01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EAMY_2004 (fadD1)
Exosome [BR:
eam04147
]
Exosomal proteins
Exosomal proteins of breast milk
EAMY_2004 (fadD1)
Exosomal proteins of breast cancer cells
EAMY_2004 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF7159
Motif
Other DBs
NCBI-ProteinID:
CBA20954
UniProt:
D4I417
LinkDB
All DBs
Position
complement(2063271..2064989)
Genome browser
AA seq
572 aa
AA seq
DB search
MTSNINFRGNSLHKVWLNRYPVDVPAEINPDRYGSLIDLFEHAVLRYARQTAFINMGQRL
SFSQLDSRSRSFAAYLQQGLGLQKGDRVALMMPNLLQYPVALFGILRAGMVVVNVNPLYT
PRELEHQLRDSGASAIVIVTNFAHTLERVVANTRVKHVVLTSLGDQLSAAKGTLVNFVVK
YIKKMVPTYHLPGAVSFRQALQSGAQMEYVKPHIVNDDLAFLQYTGGTTGVAKGAMLSHR
NMQANLEQTKATYGSLLKAGKETVVTALPLYHIFALTVNCLLFIELGGANLLITNPRDIP
GLVKELGKYPFSAITGVNTLFNALLNDAAFNRLDFSSLSLSAGGGMPIQKAVAERWEKLT
GHYLLEGYGLTECSPLVSVNPHDIQCHNGSIGLPVPSTDIMLVDDAGNETAAGEPGELCI
KGPQVMSGYWQRPQDTGEVLKNGWLRSGDIVTVDDEGFLRIVDRKKDMILVSGFNVYPNE
IEEVVMLHPKVAEAAAIGVPDDVAGETVKICVVRKDASLTADEVIAHCKNHLTGYKVPKI
VEFRNELPKTNVGKILRRQLREEANTIAQQSR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaatatcaactttcgaggcaactcgttgcataaggtttggttaaaccgatac
cccgtcgatgtaccggcagagattaatcccgatcgctacggctcgcttatcgatctgttt
gaacatgccgtactgcgctatgccaggcaaacggcgtttatcaacatgggccaacgtctc
tctttcagccagttagactcgcgtagccgttcatttgcggcctacctgcaacagggcttg
ggtttgcagaaaggcgatcgggtggcactgatgatgcccaacttgctgcaatatcctgtc
gccctgtttggcatactgcgcgccggaatggtcgtagtgaacgtcaacccgctgtatacg
ccacgcgaacttgagcaccagttgcgggacagcggcgccagtgccatcgttatcgtaacc
aattttgcccatacgttggaaagagtggtggccaataccagggtgaagcacgttgtgctt
accagtcttggcgatcagctgtcagccgcaaaagggacgctggtcaactttgtcgttaag
tatataaaaaaaatggtgccgacttatcatctgccgggagcagtctcttttcgtcaggcg
ctgcaaagtggcgcacagatggaatatgttaaaccgcacattgttaatgacgatttggca
ttcctgcaatataccggcggtactaccggcgtggccaaaggggcgatgctgtcccatcgc
aatatgcaggctaatctggagcagactaaagcgacctacggttcactgctgaaagcgggt
aaagagaccgtagtcacggcattgccgctctaccatatattcgcgctgacggtgaactgt
ttactgtttatagagcttggcggggccaacctgctgataactaacccgcgcgatattccg
gggctggtcaaggagctgggcaaatatccgttcagcgccattaccggcgtcaataccctg
tttaacgcgctactgaatgatgcagcttttaaccggctggatttctcctcgctcagcctg
tcggcaggcggcggtatgcccatacaaaaagcggtcgccgagcgttgggagaaactcacc
gggcactatctgctggaaggctatgggctgacggagtgctcaccgctggtatcggtcaac
ccgcatgatattcagtgtcacaatggcagcatcggtttacccgtgccctccaccgatatt
atgctggttgatgatgcgggaaacgaaacggccgctggtgagcccggtgagctgtgtatc
aaagggcctcaggtcatgtcaggatactggcagcgcccgcaggataccggtgaggtgttg
aaaaatggatggcttcgcagtggtgatattgttaccgttgatgatgaaggttttctacgc
attgtcgatcgtaaaaaagatatgattctggtctccgggttcaacgtctatccgaatgaa
attgaagaggtggtgatgctgcatccgaaagtggctgaagcggcagccatcggcgtaccg
gatgatgttgccggtgaaacggtgaaaatctgcgtagtgaggaaagacgcgtcactgacc
gcagatgaagtgatagcccactgcaagaatcatctgactggttacaaagttcccaaaatt
gttgagtttcgcaatgagcttccaaagaccaacgtgggtaaaatcctgcgacgccaactg
cgcgaggaagcaaacaccattgcgcagcagtcacgctga
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