Erwinia amylovora CFBP1430: EAMY_2217
Help
Entry
EAMY_2217 CDS
T01197
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
eam
Erwinia amylovora CFBP1430
Pathway
eam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EAMY_2217 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eam03400
]
EAMY_2217 (sbcB)
Enzymes [BR:
eam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
EAMY_2217 (sbcB)
DNA repair and recombination proteins [BR:
eam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EAMY_2217 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAMY_2217 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EAMY_2217 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CBA21287
UniProt:
D4HW68
LinkDB
All DBs
Position
2252302..2253729
Genome browser
AA seq
475 aa
AA seq
DB search
MKDKPIQPTFLFHDYETFGKSPSLDRPAQFAAIRTDMDFNLIGEPEVFYCRPADDYLPQP
EAVMITGITPQIARQRGLSEAEFTARIHLLFSAANTCVVGYNNVRFDDEVSRNLFYRNFY
DPYAWSWQHGNSRWDLLDVMRACYALRPDGITWPENDDGFPSFRLEHLTKANGVAHENAH
DAMSDVYATIAMAKLVKEKQPRLYDFLFSHRNKQKITTLIDIPQMKPLVHISGMFGAARG
NASWIAPLAWHPDNRNALITCDLDADMAPLLELDADALRARLYTRRDELNGASPVPLKLV
HINKCPVVAPANTLRPEDAERIGIDRQRCRDNLALLRQHPEVREKVVTLFAEAPPFTPSD
DVDSQIYNGFFSDADRNAMNIVRQTAAENLPALDLTFNDARIEKLLFRFRARNFPGTLDD
KEQQRWLQHRRQMFSPERVQGYVQELEMLFNQYEGDQARQEQLKALFAYMQELVS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagataagccaatacagcccactttccttttccacgattacgaaacctttggcaaa
agcccgtcgctggaccgtcctgcgcagttcgccgctattcgtaccgatatggatttcaat
cttattggcgagccggaagtgttttactgccggccggcggatgactatttaccgcagccg
gaggccgtgatgatcaccggtatcacgccgcagattgcccgccagcgcggcctgagcgaa
gctgaattcaccgcccgtattcatctgctgtttagcgcagcgaatacctgtgtggtgggc
tataacaacgtacgtttcgatgacgaagtgagccgaaaccttttttaccgcaacttttac
gacccttacgcctggagctggcagcatggcaacagtcgatgggacctgctggacgtcatg
cgcgcctgttacgccttgcgcccggacggtattacgtggcctgagaatgacgacggcttc
cccagcttccgcctggaacatctgacgaaagctaacggagtcgcgcatgaaaatgcgcat
gatgcgatgtcggatgtctatgccaccatcgcgatggcaaaactggtgaaggagaaacag
ccgcgcctgtatgatttcctgttcagccatcgtaacaagcagaaaatcactacactgatc
gacataccgcagatgaagccgctggtgcatatttctggtatgttcggcgcagccagaggc
aatgccagctggattgctccgctggcgtggcatcctgataaccgtaacgcgctgataacc
tgtgacctggacgcagatatggccccgctgctggagctggacgctgatgcgttacgcgcg
cggttgtatactcgccgcgacgaactaaacggtgcctcgcctgtaccgctaaagctggtg
catatcaataaatgcccggtggttgctccggccaatacgttgcgcccggaggatgcagaa
cgcatcggcatcgatcgtcagcgctgtcgcgataatctcgccctgttgcggcaacatccg
gaagtgcgtgaaaaagtggttacgctttttgccgaagcaccaccttttaccccatctgat
gatgttgatagccagatttacaacggctttttcagtgatgcggaccgtaacgcgatgaac
atcgtgcgccagaccgcagcggaaaatttgccggcgctggatctcacctttaacgatgcg
cgtattgaaaagctgctgtttcgctttcgcgcacgtaacttccccggcacgctggacgat
aaggagcaacaacgctggttgcaacaccgccgtcagatgttcagccccgaacgtgtgcag
ggctatgtgcaggagctggaaatgctgttcaatcagtacgagggagatcaagccagacag
gagcagctcaaggccctgtttgcgtatatgcaggaactggtgtcttaa
DBGET
integrated database retrieval system
