Erwinia amylovora CFBP1430: EAMY_2622
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Entry
EAMY_2622 CDS
T01197
Symbol
rnc
Name
(GenBank) RNase III, ds RNA
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
eam
Erwinia amylovora CFBP1430
Pathway
eam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EAMY_2622 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eam03019
]
EAMY_2622 (rnc)
03009 Ribosome biogenesis [BR:
eam03009
]
EAMY_2622 (rnc)
03036 Chromosome and associated proteins [BR:
eam03036
]
EAMY_2622 (rnc)
Enzymes [BR:
eam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EAMY_2622 (rnc)
Messenger RNA biogenesis [BR:
eam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EAMY_2622 (rnc)
Ribosome biogenesis [BR:
eam03009
]
Eukaryotic type
90S particles
RNase
EAMY_2622 (rnc)
Prokaryotic type
rRNA processing factors
EAMY_2622 (rnc)
Chromosome and associated proteins [BR:
eam03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EAMY_2622 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
CBA22094
UniProt:
D4HYG6
LinkDB
All DBs
Position
complement(2710263..2710943)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINKLQRKLGYTFTHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYQRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGYRRESILADTVEALI
GGVFLDSDIQRVEQLILSWYASRLDQISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGMADPVVGTGSSRRKAEQAAAEQALTKLGIE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccattgtaattaacaagcttcagcggaagttgggctacacttttactcatcag
gaattattacagcaggcactcactcaccgcagtgccagcagtaagcacaacgaaagactg
gaattcctcggtgactctattcttagctacgtgattgcaaacgcactttatcagcgcttc
ccacgcgtggatgaaggcgatatgagccgtatgcgcgcaacgctggttcgcggtaatacg
ttggctgaaatggcacgggaatttgaccttggcgaatgcttgcgcctggggcctggtgaa
ctgaaaagcggcggctaccgtcgtgagtcgattctggcagacaccgttgaggcgttgatt
ggcggggttttcctcgacagcgacattcagagggtggaacaactgatcctcagttggtac
gccagccgtctcgatcagatcagtccaggcgacaaacaaaaagatccaaaaacgcgtctg
caggagtttctgcagggccgccatctgccgttgccctcttatctggtggtacaggttcgg
ggcgaagcgcacgatcaggaatttactattcactgccaggtaagcggcatggcagatccg
gttgtgggaaccggatccagccgccgcaaagctgagcaggcagcggccgaacaggcgctg
actaagctgggaattgaatga
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