Erwinia amylovora CFBP1430: EAMY_3287
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Entry
EAMY_3287 CDS
T01197
Symbol
soxS1
Name
(GenBank) HTH-type transcriptional regulator soxS
KO
K13631
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
eam
Erwinia amylovora CFBP1430
Brite
KEGG Orthology (KO) [BR:
eam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eam03000
]
EAMY_3287 (soxS1)
Transcription factors [BR:
eam03000
]
Prokaryotic type
Helix-turn-helix
AraC family
EAMY_3287 (soxS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_3
DUF4350_C
DUF772
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
CBA23403
LinkDB
All DBs
Position
3394429..3394854
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AA seq
141 aa
AA seq
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MHDDIINTLTNWIDNNLDKALSIEEVAAKSGYSKWHLQRMFRAVTKQTLGGYIRERRLMR
AAEALRQSQRPVFDIAMQYGYDSQQTFSRVFRRQFSQTPTAYRNTMRRQRLQRSSWNFDC
GDYPASSFQPQRNDKSCPICN
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgacatcatcaacaccctgaccaactggatcgacaataatctggacaaagcc
ctgtcgattgaggaagtggctgcaaaatcaggctactcaaagtggcatttacagcgaatg
ttccgcgcggtgacaaaacagacgttgggtggatatatccgggaacgccgtttaatgcgg
gctgccgaagcgctgcgccagagtcaacgcccggtttttgatatcgccatgcaatatggt
tacgattcgcagcaaactttctcccgggtatttcgtcgtcagttttcccagacgccaacg
gcttaccgtaataccatgcgccgccagaggctacagcgcagcagctggaattttgactgc
ggcgactacccggccagcagctttcaaccgcagcgaaatgacaaaagctgcccaatctgt
aactaa
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