Ewingella americana: GXP68_04090
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Entry
GXP68_04090 CDS
T06747
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
eame
Ewingella americana
Brite
KEGG Orthology (KO) [BR:
eame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eame03009
]
GXP68_04090 (srmB)
Enzymes [BR:
eame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GXP68_04090 (srmB)
Ribosome biogenesis [BR:
eame03009
]
Prokaryotic type
rRNA helicases
GXP68_04090 (srmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QMV50619
LinkDB
All DBs
Position
complement(873366..874697)
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AA seq
443 aa
AA seq
DB search
MTVTNFSELELDERLIDALSEKGYSRPTVIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVAEQARELAKHTDLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAIETLILDEADRMLDMGFAQDIETISAEARW
RKQTLLFSATLEGEAIREFAERILTEPVEIEADPSRRERKKILQWYYRADDVAHKTQMLI
HLLNQEDVTKSVIFVRKRERVHELVAWLREAGINSCYLEGEMVQVKRTEAVKRMVEDRVN
VLVATDIAARGLDINDISHVFNFDLPLTADTYLHRIGRTGRMGRKGTAISFVEAHDHLLL
GKIGRYLNEPLKPRVIDELRPKTKAPSEKTTGKPSKKVLAKRKEKQKEAQAKSKVKVKVR
HRDSKNVGKRRVKAEADTKGSAK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccaatttttccgaactcgaactcgatgaacgcctaatagacgccctgagc
gaaaaaggctatagccgcccgactgtcattcaggcagaggccattccgccagcgatggac
ggacgcgatgtgttgggttcggctcctaccggcaccggcaaaacagcagcgttcttgctg
cctgcattgcagcatttgctggatttcccgcgtaagaaatctggtccgccacgtattctt
attctgacgccaacccgcgaacttgcgatgcaggttgctgaacaggcgcgcgaactcgcc
aagcacactgatttagacatcgccactatcactggcggcgtggcgtacatgaaccacgcc
gaagtgttcagcgaaaatcaggacatcgtggtcgccaccacgggccgcttgctgcaatac
atcaaagaagaaaactttgactgccgcgccattgaaacgctgatccttgacgaagctgac
cgcatgctggacatgggcttcgcgcaagatatcgaaaccatttccgccgaagcgcgctgg
cgcaaacagacgttgctgttctccgcaacgctggaaggcgaagcgattcgcgaattcgca
gaacgcattctgaccgaaccggttgagatcgaagccgatccttctcgccgcgaacgcaaa
aagattttgcagtggtactaccgcgccgatgacgtcgcgcacaagacccagatgttgatc
caccttctgaatcaagaagatgtgactaagtccgtgatcttcgtgcgtaagcgcgagcgc
gtgcacgagctggtcgcctggctgcgtgaggcagggatcaactcctgctatctcgaaggg
gaaatggttcaggttaaacgtactgaagcagtgaaacgcatggttgaagaccgcgttaac
gtgctggttgccaccgatatcgccgcgcgcggtctggatatcaacgacatcagccacgtg
ttcaacttcgacctgccgctgaccgcagacacctacctgcaccgtattggccgtactggc
cgtatgggccgcaaagggactgcaatctccttcgtcgaagcgcatgaccatctgctgctg
ggcaaaattggccgttacctgaatgagccactgaagccgcgcgtgattgatgagctgcgt
ccgaaaaccaaagcgccaagcgaaaaaaccaccggcaagccgtcgaagaaggtgctggcg
aagcgtaaagagaagcagaaagaagcgcaggcaaaatcaaaagttaaagtgaaagtgcgc
caccgcgacagcaaaaacgtcggtaaacgccgcgtgaaggctgaagctgacaccaaaggc
agcgcaaaataa
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