Ewingella americana: GXP68_04370
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Entry
GXP68_04370 CDS
T06747
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
eame
Ewingella americana
Brite
KEGG Orthology (KO) [BR:
eame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eame03400
]
GXP68_04370 (sbcC)
DNA repair and recombination proteins [BR:
eame03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GXP68_04370 (sbcC)
Archaeal homologous recombinant proteins
GXP68_04370 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
cobW
AAA_21
TsaE
AAA_14
nSTAND3
NTPase_1
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
QMV50668
LinkDB
All DBs
Position
complement(931007..934255)
Genome browser
AA seq
1082 aa
AA seq
DB search
MKILSLRLKNLNSLEGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVSPTQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNSPDGNLQAPKVELALLED
GKILADKVRDKLDAIAQLTGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGRLSEQVFEQHKQAKNQLEGLHQRMAGIELLSEEQRQLLEGQLAEVNLQELQLSQQAQA
QQRDLNWLQQWQQAQLKQQQYQQLLQASEQEAAQAAPQLLQLAQSEPAEKLRPLLNDRNR
LRQDNLALSQHLKELGEQQANQLQQMAPLAQAVEQARTARQQQVQTQEQQQKLIDEQVQP
LDNQIAQLDKTQADSQQALSDTQKQATELAATLEQLSADRLKLEQQSQQHQAQQATLAAA
LGSQQKQQAELEQRHPLTALQQRQSELTRLRPVRQQLFSLSQQYPQISQRVEQQSQEFTQ
RHAELAAAEKQLEQIRQEFKQHKAHQTDVEKLLEQEKLIVSLEAERSRLQTGEACPLCGS
TEHPAIEQYQSVKPSETEQRVAEMRAKTEALHTQGTELRAKTESLKEQQARLQNQLVRDQ
NQQKAYLENWQQLTAPLSLSFELQDAAQLEQWLVERDQEEQQCQQLSSQHEQQARALQQA
KDALTAAQNEQLKAQQQAALLTERFTLMQSNHTQQQQQLAKLQQQVAQDGESLQKLRQQR
VALFGEQQISQVREQLRAQLQASENALQAASEQLQKSQELRDRLAGQVASATTSQQQLTA
RLQQAESAWQQALSTSDFADEQAVSLALLDDTLRQQLQQRKEQLQQKLAEHRALLEQANL
TLEQQRQQRPETLSETDSDTAPLAERLEQLAQQLKVLQQRQGEIRNQLTTDVARREGQQN
LIAQIAQSQQLCDDWGYLNSLIGSSDGAKFRKFAQGLTLDHLVYLANKQLEKLHGRYLLQ
RKTSDALELQVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSDKTRIDSLFLDEG
FGTLDADTLDTALDALDSLNASGKTIGVISHVEAMKDRIPVQIKVTKVNGLGVSRLSSQF
KV
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcggcttaaaaacctcaactcgctggaaggcgagtggaaaatt
gatttcaccgccgagccttttgccagcaacgggctctttgccattaccggcccgaccggc
gcggggaaaaccaccctgctcgacgccatctgtctggcgctttaccaccagacgccgcgc
ctcaacgtgtcgccaacccaaaatgagctgatgactcgccacaccgccgaatcactggca
gaggtggagtttgaagttaagggtgttggctaccgcgccttctggagccagcgccgggcc
aagaactcgccagacggcaacctgcaagcgccgaaggtggaactggcgctgctggaagac
ggtaaaattctagccgataaagtgcgcgacaagcttgacgccatcgcccagctcaccggg
ctggattttggccgtttcaccaagtcgatgatgctgtcgcagggccagtttgccgccttc
ctcaacgccgacgccaatgaccgcgccgagctgctggaagagctgaccggcaccgagatt
tacggtcggctgtccgagcaggttttcgagcagcacaagcaggcgaaaaaccagctcgaa
ggtttgcatcagcgcatggcgggcattgagctgctcagcgaagagcagcgccagcttttg
gaaggccaactggccgaggtaaacctgcaagaactgcagcttagccagcaggcgcaggcg
cagcagcgcgacctcaactggctacaacagtggcagcaggcgcagctcaagcagcagcaa
tatcagcaactgcttcaggccagcgagcaggaagccgcgcaggccgcgccgcagttactg
caactcgcgcagagcgaaccggcggagaaacttcgccccctgctcaatgaccgcaatcgt
ctgcggcaggacaatctggcactcagccagcatctcaaagaactgggcgagcagcaggcc
aatcagcttcaacagatggctcctctggcgcaggccgtcgagcaggcccgcacggctcgc
cagcagcaggttcaaacccaagagcagcagcagaagctgattgacgagcaggtgcagccg
ctggacaaccagattgcccagctggataaaacgcaggcagacagccaacaggctttatcc
gacacccaaaagcaggcgacagagctggcggcaaccttagaacaactgagcgcggatcgc
ctgaagctggagcagcagagtcagcaacatcaagcccagcaggccactctcgccgccgca
ctgggcagccagcaaaagcagcaggccgagctggaacaacgccatccactgacggcactg
cagcagcgccagtccgagctgactcgcctgcgcccggtgcgccagcagctgttttccctc
tcccagcagtatccgcaaatcagccagcgggttgagcaacagagccaagaatttacccag
cgtcacgctgaattggccgcggccgagaaacagctggagcagatccgccaagagtttaag
cagcacaaagcccaccagaccgacgtcgaaaaactgctcgagcaggagaaactgattgtc
agtctggaagccgagcgttcgcgtctgcaaactggcgaagcttgcccactgtgcggctcg
accgagcacccggccattgagcaatatcagtcagttaagccgtcagaaaccgagcaacgc
gtggcagaaatgcgcgccaaaactgaggcgctgcacacgcaaggcaccgagctgcgggcc
aaaaccgagagcctgaaagagcagcaggcgcggctgcaaaaccagttggtgagggaccaa
aaccagcaaaaagcctatctcgaaaactggcaacagctgactgccccgcttagtctcagt
tttgaattacaagacgcggcgcagttggaacaatggctggtagaacgcgaccaagaagag
cagcagtgtcagcaacttagcagccagcatgagcagcaggcacgggcgttacagcaggcg
aaagatgccctgacggcggcgcagaatgagcagctcaaagcccagcagcaggccgcgtta
ttaacggaacgcttcacgctgatgcagagcaatcatactcagcaacagcagcagttggca
aagcttcagcaacaggtcgctcaagatggcgaaagcttgcaaaagctccgccagcagcgg
gtggcgttgtttggcgaacagcagatttctcaggtacgcgagcagttgcgcgcccagctg
caagccagtgaaaatgccttgcaggccgccagcgaacagctgcaaaaatcgcaggagctg
cgcgacaggctggccgggcaggtcgccagcgcgaccacctctcagcagcagttgaccgcg
cggttgcaacaggccgaaagtgcgtggcagcaggcgctaagcaccagtgatttcgccgac
gagcaggcggtcagcctcgccctgctcgacgacaccctgcgccagcagttgcagcagcgc
aaagagcagcttcagcagaaactggccgagcatcgcgccctactggaacaggccaatctc
acccttgagcagcagcgccagcagcggccggaaaccctgagcgaaaccgacagcgacacc
gcgccgctggccgaacgcctcgagcaattagcccagcagttaaaagtcttgcagcagcgt
cagggggagatccgcaaccagttgaccaccgacgtcgcacgccgtgaggggcagcaaaac
ctgatcgcgcagattgctcagtcacagcagctgtgcgacgactggggctatttgaactcg
ctgattggctccagcgacggcgcgaaattccgcaaatttgcccaaggtctgacattggat
catctggtgtatctggcgaataagcagctggaaaagctgcacggtcgctatctgttgcag
cgcaaaaccagcgacgcgctggagttgcaggtggtggatacctggcaggctgacgcggta
cgtgacacccgcactctgtcgggcggcgagagcttcttggtcagtctggcactggcgctg
gcgctctccgatctggtgagtgacaagactcgcattgactcactgttccttgatgaaggc
ttcggcaccctcgacgccgacacgctggacaccgcgctggacgccctcgacagcctaaac
gcctcgggcaaaaccatcggcgtgattagccacgtggaggccatgaaagaccgcattccg
gtgcaaatcaaagtcaccaaggtcaatggtctgggcgtcagccgtctaagcagccagttt
aaagtctga
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