Ewingella americana: GXP68_08015
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Entry
GXP68_08015 CDS
T06747
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
eame
Ewingella americana
Brite
KEGG Orthology (KO) [BR:
eame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eame03009
]
GXP68_08015 (dbpA)
Enzymes [BR:
eame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GXP68_08015 (dbpA)
Ribosome biogenesis [BR:
eame03009
]
Prokaryotic type
rRNA helicases
GXP68_08015 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Helicase_C_2
Ebola-like_HR1-HR2
P-loop_SecA
DUF359
DUF2247
Motif
Other DBs
NCBI-ProteinID:
QMV51307
LinkDB
All DBs
Position
1727486..1728868
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AA seq
460 aa
AA seq
DB search
MSTHSFSVLPLPAEQLSNLSELGYAEMTPIQAASLPAILQGQDVRAKAKTGSGKTAAFGI
GLLDKITVGQFVTQSLVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQAIGPQLESL
VHPAHIIVGTPGRIQEHLRKGTLKLDQLKVLVLDEADRMLDMGFSEDIEDVVSYAPQDRQ
TLLFSATYPEGIERISNKFQRQPVKVEIEGEDDIADIKQVFIETDRNQRLSLLTAVLYQQ
QPASCVVFCNTKRDCQEIYEALAGKGISALALNGDLEQRDRDRVLVRFANGSCRVLVATD
VAARGLDIKQLSLVINYELSFDPEVHVHRVGRTGRAGTSGLAVSLVTPQEMVRVHALEDY
TRQAVVWQPAAQVMSAPPVALDPEMATLCIDGGRKAKIRPGDILGALTGDAGLTAAEVGK
IDMFPVHAYVAIRQKSAKKALQRLQEGKIKGKSCKAIILR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacgcattcattctccgtcctgccactgcccgccgagcagctttctaacctgtcc
gagctgggttatgccgaaatgaccccgattcaggccgcgtctttaccggctatcctgcaa
gggcaggacgtccgcgccaaagccaaaacgggcagcggtaaaacggccgcgttcggcatc
gggctgctggataaaatcaccgtcgggcaattcgtgacccagtcgctggtgctctgtcca
acccgcgaactggccgatcaggtcagcaaagagctgcgccgtctggcacgcttcacccag
aacattaaaattttgaccctgtgcggcgggcaggccatcgggccacagctagagtctctg
gttcacccagcgcacatcatcgtcggcacgccgggccgtattcaggagcacctgcgtaaa
ggcacgctgaagctggatcagctgaaagtgctggtgctggacgaagcggatcgcatgctg
gatatgggctttagcgaagatattgaagacgtggtgagctacgcgccgcaagatcgccaa
accctgctgttctccgcgacttacccggaaggcatcgagcgcatcagcaacaaattccag
cgtcagccggtgaaagttgaaatcgaaggcgaagatgacattgccgacatcaagcaagtg
ttcatcgaaactgatcgcaatcagcgtctgtcgctgctgacggcggtgttgtatcagcag
cagccagcctcctgcgtggtgttctgtaacactaagcgcgactgtcaggagatttacgaa
gcactggcaggcaagggcattagcgcgctggcgctgaatggcgacctcgagcagcgcgac
cgtgaccgcgtactggtgcgtttcgccaacggcagctgccgcgtactggtggcaaccgac
gtcgccgcgcgcggcttggatatcaaacagctgagtctggtgatcaactacgagctgtcg
tttgacccggaagttcatgtccaccgcgtaggccgtacgggccgtgcaggcaccagcggc
ttggcggtgagtctggtcacgccgcaggagatggtgcgcgttcacgccttggaagattac
acccgtcaggccgtggtttggcagcctgcggcgcaggtgatgtctgcaccgcccgtggcg
ttggacccagaaatggcgaccttgtgcatcgacggcggccgtaaagccaagatccgtccc
ggcgatattttaggggcgttgaccggtgatgccgggctgacggcggcggaagtggggaaa
atcgatatgttcccggttcacgcctatgtagcgattcgccagaagagcgccaagaaagcc
cttcagcgcctgcaagaaggcaaaatcaaaggcaaaagctgcaaagcgattatcttgcga
taa
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