Ewingella americana: GXP68_14565
Help
Entry
GXP68_14565 CDS
T06747
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eame
Ewingella americana
Pathway
eame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXP68_14565 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eame03019
]
GXP68_14565 (rhlE)
Enzymes [BR:
eame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GXP68_14565 (rhlE)
Messenger RNA biogenesis [BR:
eame03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GXP68_14565 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QMV52437
LinkDB
All DBs
Position
complement(3187343..3188755)
Genome browser
AA seq
470 aa
AA seq
DB search
MSFDTLGLSAEILRAVEEQGYREPTPIQRQAIPVVMQGRDLMASAQTGTGKTAGFTLPLL
NMLSHSNPQFKGRRPVRALILTPTRELAAQIGENVQSYSKYLTLRSLVVFGGVSINPQMM
KLRAGVDVLVATPGRLLDLEHQNAVDLSKVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKALAGKLLTNPASVEVARRNTASEQIEQSVHFVDKKRKRELLSQMI
GEGDWKQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGGIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAESTGEAISLVCVDEHKLLRDI
ERLLKREIPRIAFEGYEPDPSIKAEPIINGRQGSGGRGAPRQGGQRSGSGAPRSSAPRTG
GNGQRSGNGGGESRGAGAGEGRPARPARAANAGQRRSNPANAGRRKPSGE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgatactctcggcttaagtgccgaaattttgcgtgctgttgaagaacagggc
tatcgtgaacctacgcctattcagcgtcaggctattcctgttgtgatgcaaggccgtgac
ttaatggcaagtgcgcagaccggtaccggtaaaaccgctggttttactctgccactgctg
aacatgctgagccactccaacccgcaattcaaaggacgtcgcccggtccgcgcgctgatc
ctgactccgacccgtgagctggcagcacagatcggtgagaacgtgcagtcttacagcaag
tatttgaccctgcgctcgctggtggttttcggcggcgtgagcattaacccgcagatgatg
aaactgcgcgccggtgttgacgtgctggtcgctacccctggtcgtctgctggacttagaa
catcagaacgcggtggatttatccaaagtcgaaattctggtgctggacgaagctgaccgc
atgctggacatgggcttcatccacgacatccgtcgcgtactggcgaaattgcccgctaaa
cgccagaacctgctgttctccgcgaccttctctgacgaaatcaaagcgctggctggcaaa
ttgctgaccaaccctgcgtcggttgaagtggcgcgtcgtaacactgcctccgagcaaatc
gaacagagcgttcatttcgttgataaaaaacgtaaaagagaactgctgtcacagatgatt
ggcgaaggcgactggaaacaggtgctggtgttcacccggactaaacacggtgcgaaccat
ttggccgagcagttgaataaagacggcatcaccgccgccgctattcacggtaataaaagt
cagggtgcccgtacccgcgcactggctgatttcaaagacggcggcattcgcgtgctggta
gctactgacatcgcggcgcgcggcctggacatcgaccaactgcctcacgtcgtcaactat
gaactgccaaacgtgccggaagactacgttcaccgtattggccgtacaggccgtgcggaa
tccactggtgaagcgatttctctggtgtgcgtcgatgaacacaaactgctgcgtgacatt
gagcgcctgctcaagcgtgaaatcccacgcatcgcgtttgaaggctatgagccagaccca
agcatcaaagctgagccgatcatcaatggtcgtcaaggcagcggcggtcgcggtgcgcca
cgtcagggcggtcaacgttctggctccggcgcacctcgctcaagcgctccgcgcaccggc
ggcaatggtcaacgtagcggcaacggcggcggcgaaagccgtggcgcaggcgcgggtgaa
ggtcgtccagcacgtccggcgcgcgcagctaacgcaggtcagcgtcgctcaaacccggct
aacgcagggcgtcgtaaaccgtctggcgaataa
DBGET
integrated database retrieval system
