Ewingella americana: GXP68_16960
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Entry
GXP68_16960 CDS
T06747
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
eame
Ewingella americana
Brite
KEGG Orthology (KO) [BR:
eame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eame03016
]
GXP68_16960 (truD)
Enzymes [BR:
eame01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GXP68_16960 (truD)
Transfer RNA biogenesis [BR:
eame03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GXP68_16960 (truD)
Prokaryotic type
GXP68_16960 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QMV53800
LinkDB
All DBs
Position
complement(3692870..3693916)
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AA seq
348 aa
AA seq
DB search
MDMSRLTWLYGEPASTGKLKANPEDFIVEEDLGFEPDGEGEHLLVRIRKNGCNTQFVAEQ
LARFAGIHPRSVSYAGLKDRHAVTEQWFCVHLPGKEDPDLSQFALEGCEVIRAARHRKKM
RIGTLKGNAFTLVLRQLSDIADVEARLQQVAEQGVPNYFGEQRFGRGGNNLIQAARWANN
EIRVKERPKRSFYLSASRSAMFNLIASQRLADNTQRQVMLGDALQLSGRGSWFVAKEDEF
DTLQPRVNSNELLITAPLPGDGPLGTTDAAEAFEQGCLAECATLLSLIKRERVEPARRAV
MLQPLDISWKRWDDVTLELKFWLPAGSFATSVVRELMRQENFDADIAE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtcccgcctgacttggctttacggtgaacctgcttcgactggcaagctgaaa
gccaacccggaagatttcattgttgaggaagatctcggctttgagcctgacggcgagggt
gagcatctgctggtgcgtatccgtaaaaatggctgcaacacccagtttgtggccgagcag
ctggcgcgctttgcggggatccatccgcgctctgtcagctacgcggggttgaaagaccgc
cacgcggtgaccgaacagtggttttgcgtgcatcttccgggtaaagaagatcctgattta
agccaattcgccctagaaggctgcgaggtgatccgcgctgcccgtcatcgcaagaaaatg
cgtatcggtactttgaaaggcaatgcctttaccttggtgctgcgccagctgagtgatatc
gccgatgtcgaagcgcgcttgcagcaggtagcagagcagggcgtgccgaactattttggc
gaacagcggtttggccgtggtggcaataacctgattcaggccgcgcgctgggcgaataat
gagattcgcgtcaaagagcgccctaagcgtagtttttacctttccgccagccgcagcgcg
atgttcaacctcatcgccagccagcgtttagccgataatactcagcgtcaggtgatgctg
ggtgacgccttgcagttgagcgggcgcggcagctggtttgtggccaaagaagatgaattt
gacacgctccagccacgtgttaatagtaatgaattgctgataaccgccccattgccgggt
gatggcccgctaggtaccaccgacgccgccgaggcgtttgagcagggctgtctggcggag
tgcgccacgttattatcattaattaagcgcgaacgcgttgaaccggctcgccgtgcagtg
atgctccagcctttagatatcagctggaagcgttgggacgatgtcacacttgagctgaaa
ttctggcttcctgctggcagttttgcgaccagcgtggtgcgagaactgatgcgccaggaa
aattttgatgcggatattgctgagtaa
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