Ewingella americana: GXP68_17075
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Entry
GXP68_17075 CDS
T06747
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
eame
Ewingella americana
Brite
KEGG Orthology (KO) [BR:
eame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eame03009
]
GXP68_17075 (rlmD)
Enzymes [BR:
eame01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GXP68_17075 (rlmD)
Ribosome biogenesis [BR:
eame03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GXP68_17075 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
RrnaAD
PCMT
MTS
Methyltransf_11
Methyltransf_23
DOT1
TRM5-TYW2_MTfase
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QMV52862
LinkDB
All DBs
Position
complement(3718782..3720155)
Genome browser
AA seq
457 aa
AA seq
DB search
MAQFYSPNRRVTTRQTITVTATDLDAFGQGVARHNGKAVFISGLLPGEQAEVTLTEDKRQ
YAKGRVKRLLTTSEQRVKPACPHFNTCGGCQQQHASEVLQQQSKSAALLRLISRETGVEA
QPQPVIAGPQYGYRRRARLGLQIAGSAKGGGKGKNKMASSSSSSTLVMGFRQEGSNDLVA
INRCPVLRPELERLLVPLQHCLSQLSAAQRLGHVELVLAENGPLIVLRHLDPLKEQDRTS
LLAFGAEHGVALWLAAESDSLELLCGEQPLYQIDDLSLKFSPRDFIQVNDDVNQQMVAQA
IEWLDLNSDDRLLDLFCGVGNFTLPLAKRVKHVTGVEGVATLVANGQDNAIRNNLNNAEF
FHENLEEDVSQQPWAAQGFNKVLLDPARAGAAGVMAHIIKLDPQRVVYVSCNPTTLARDS
KILLEAGYRLAQVRMLDMFPHTGHLESMALFINPSAA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcccaattctactctccgaatcgtcgcgtgacgacccggcaaacaataactgtgact
gccaccgaccttgatgcatttggtcagggtgtggcgcgccacaatggtaaagcagtgttt
atcagcgggttgctgcccggcgaacaggccgaggtgacgctcaccgaggataaacgccag
tatgccaaagggcgtgtaaaacgcctgctgaccaccagtgaacagcgcgtaaaaccggcc
tgtccgcatttcaacacttgtggcggctgtcagcagcaacatgccagtgaagtattacag
caacagagcaaatctgcggccttattacgtcttatttcacgcgaaacgggggtagaagcg
caaccccagccggtgattgctggtccacagtatggctatcgacgccgcgcgcgactgggt
ttgcagattgccggaagtgctaaaggcggcggcaaaggcaaaaataaaatggcgtcttcc
tcatcttcttctacgctggtgatgggttttcgtcaggaaggctcgaatgatttggtggcg
ataaatcgctgcccggtgctgcgcccagagttggaacgcctgttggtgcctttgcaacac
tgcctttcgcaactctcagcggcccagcgtttggggcatgttgagctggtgctggccgaa
aacggtccactgatagtgctgcgccatcttgacccgttgaaagagcaagaccgcaccagc
ctgttggccttcggcgctgaacacggcgtggccctgtggctggcggcagagagcgacagc
ttagagctgctgtgcggcgagcagccgctgtaccaaatcgacgatttgtcgctgaaattc
agcccgcgcgatttcattcaggtgaatgatgacgtcaaccagcaaatggtggcacaggcg
atagaatggctagatctcaattccgacgatcgcctattggatttattctgcggtgtgggt
aatttcaccctgcctttagccaagcgtgtaaagcatgttacaggcgtagaaggtgttgcc
acgctggtggcgaatgggcaagataatgccattcgaaataatttgaacaatgctgaattc
ttccatgaaaacttggaagaggatgtcagccagcaaccgtgggcggcacaaggctttaac
aaagtgctgctcgaccccgcaagggccggagccgctggcgttatggcacatattattaag
ctggatccgcagcgcgtggtgtatgtctcatgcaaccccacgactttagcgcgggacagc
aaaattttgttggaggcgggttatcgcttagctcaggttcgcatgctggatatgttcccg
cacactgggcatcttgagtcgatggctctgtttatcaacccgtctgccgcctga
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