Ewingella americana: GXP68_18760
Help
Entry
GXP68_18760 CDS
T06747
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
eame
Ewingella americana
Brite
KEGG Orthology (KO) [BR:
eame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eame03019
]
GXP68_18760 (csrD)
Messenger RNA biogenesis [BR:
eame03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GXP68_18760 (csrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
Motif
Other DBs
NCBI-ProteinID:
QMV53153
LinkDB
All DBs
Position
complement(4109518..4111455)
Genome browser
AA seq
645 aa
AA seq
DB search
MRFTNRLTALISMLVAVAMLLMLLGVTFSFVYLSKQNTEQHLRALATTFDQSLLQHTPDE
AQRWMPTAMRMLDVSSITLLENKKPFLEYRESADLHVAWDSGYPDYAEITLPLMQHPSMA
LHVVYVDPITTYTHSLRSTITISFAIILMIVVVLMSFRWLRKETAGLEKLEERAQRILRG
ERENIRQGDVSEWPPFASSAIDLLMSDLAEAREQRSRVDTLIRAFAQQDAQTGLSNRLFF
DNQLATQLEEEGAHGVVMLLRLPDFDTLREIHGQGHVEELRSAMVNLLSTFVMRYSDALL
ARYFHSDCAVLLPHRTLKEAEVMAAQLVNALGALPTSNNIDRDALLYIGISAYRFGQRAE
EVMDHAEQATRNAAFQGSNSWLVYDSKVPEKGRGSVKWRTLLENTLSRGGPRLYHKAAFT
KDRKLDHREIQRRIFDGEQELLAAEFMPLVVQFGMSQSYDRQMLSQIIPLLARWPDETLA
FHLTVDSLLQRSFVRWLRDTLLQCEKKQRNRILIELAEADLCQHTERLRPVVRLLQGMGC
RLAVSQAGLTVVSTSYLKTFPVERVKLHPGLIRDIDKRIENQLFVQSLISACEGTQAKVF
ASGVRSKEEWAVLLEKGIHGGQGDFFAIPQAVEPVSKKYSHNGDV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttactaacagactcaccgcgctaatttccatgctggttgcagtagccatgttg
ctgatgctgctcggcgtgacgtttagctttgtctatctcagtaagcagaataccgagcag
catttacgggcgctggcgaccacttttgaccaatctcttctgcaacacactcccgacgaa
gcccagcgctggatgccgacggcaatgcgcatgctggatgtttcaagcatcaccctgctg
gaaaataaaaaaccttttttggaataccgcgagtccgccgatttacacgtggcgtgggac
agcggctaccctgattatgccgagataaccctgccgctaatgcagcacccgtcgatggcg
ctgcacgtggtgtatgtcgacccgatcaccacttacacccactcgctgcgttcgaccatc
accatcagcttcgcgattattttgatgattgtggtggtgctgatgagtttccgctggctg
cgcaaagagacggccgggttggagaagctggaggagcgcgcacagcgtattcttcgcggc
gagcgagagaatatccgccaaggcgacgtgtccgaatggccgccttttgccagcagcgcc
attgatttactgatgtctgacttggccgaagcccgcgagcagcgcagccgcgtggacacg
ctaatccgcgcattcgcccagcaagacgctcaaaccggcctgagtaatcggctgtttttc
gacaaccaattggcgactcagcttgaagaagagggcgcgcacggcgtggtcatgctgctg
cgcctgcctgacttcgacaccctgcgcgaaatccacgggcaggggcacgttgaagagctg
cgttccgcgatggtcaatctgctctcgaccttcgtcatgcgttattccgacgccttgctg
gcgcgctacttccacagcgactgcgccgtcttgctgcctcatcgcaccttaaaagaggcc
gaagtgatggctgcccaactggtcaacgcgctgggcgctctgccaacctctaacaacatt
gatcgcgatgctcttctttatataggtatcagcgcttaccgttttggtcagcgagccgaa
gaggtgatggatcacgccgaacaggcgacgcgcaacgcggcgttccaagggagcaacagt
tggctggtgtatgacagcaaagtgccggaaaaagggcgcggcagcgttaagtggcgcaca
ttgctggaaaataccctatcgcgcggcgggccgcgtctctatcataaggccgcttttacg
aaagaccgtaagctggatcatcgcgaaattcagcgtcgcatctttgatggtgagcaagag
ctactggccgccgagtttatgccgctggtggtgcaattcggcatgtcgcaaagctatgat
cggcaaatgctttctcagataattccgttactggcgcgctggccggacgaaacgttggca
tttcacctgacggttgattcattattgcagcgctcttttgtccgctggttacgcgatact
ttgctgcaatgcgaaaaaaagcagcgtaatcgcattctgattgaacttgcagaggctgat
ctctgtcaacataccgagcgattacgtcctgtggtccgtttgctacaaggaatgggctgc
cgtctggcggtttctcaagccgggcttaccgtagtcagcacctcatatttgaaaactttc
ccggttgaacgggtgaaactgcatccgggattgattcgagatatcgacaaaagaattgaa
aatcagctgtttgtacaaagcctgattagcgcctgtgaaggaacacaagctaaggttttc
gcttctggcgtgcgcagtaaagaagagtgggcagtattgttagagaagggcattcatggc
gggcagggtgacttttttgctatcccgcaggctgtggagcccgtcagcaaaaaatattca
cacaacggtgatgtttaa
DBGET
integrated database retrieval system
