Ewingella americana: GXP68_18915
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Entry
GXP68_18915 CDS
T06747
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
eame
Ewingella americana
Pathway
eame02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eame00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GXP68_18915 (pdeR)
Enzymes [BR:
eame01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
GXP68_18915 (pdeR)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS
PAS_9
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
QMV53181
LinkDB
All DBs
Position
4149776..4151785
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AA seq
669 aa
AA seq
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MTDAQDDSILYLHFGTPRPYWRLGSDSNALELSAEQGVTNVAVALTSPQAARIRELTGIT
SCFTIDVTLFGEPVCLYLVGRKVDSNVWAGTASDFEDTASVAHDLEVGLTFAEQVVSEAN
SVIVIIDQDGKVHRFNRLSEEYTGLREQDVIGHSAYDMFMSMEEGIASRQNITSFFQKEQ
SYEVERWINTVKGQRLFLFRNKFVHSGSGKQQKFLICSGSDITDERMAQERLRVLANTDL
ITGLANRNALQDQLKSALELRGDNQIGLIYLDLDNFKKVNDAYGHMFGDRLLKEVAHAIQ
SCLDETEILARLGGDEFIILSTQASVEKLEAISQQILGRLKAPFRIGLIEVYTGCSSGIA
VCPQHGTDAESLIRNADTAMYVAKEAGKNAHCVFSPEMNKKVSEYMWLDTNLRKALEEQQ
LQLYYQPKVSNNGEVRSVEALLRWHSPERGVIQPQSFISYAEESGLIAPLGKWVIETATR
QAAEWQKKGLNLRVAVNLSGRQLNSSSLVSDFTEAMQKVGMTQCMLDFELTESCLVEDEK
AAVTMINQLHKLGAEVHLDDFGTGYSSLSQLARIPLDCIKLDQSFVRGINHNSVSQALVR
AIVAVARTLQLTVVAEGVETHEEERLIDEIGVDSKQGYLFAKPMPADEIEHWLEQKAIAS
PGSVNNVTR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgctcaagatgactccattttatacctgcattttggtacacctcgcccctac
tggcgtttaggttctgatagcaacgcgctcgaactgtctgcggaacagggcgtaactaac
gtcgctgtagccctcaccagcccgcaagctgctcgcattcgcgaactgaccggcatcacc
tcttgcttcaccatcgacgtcacgctgttcggcgagccggtttgcctctatctggtcggc
cgcaaggtggacagcaatgtttgggcgggcaccgcctctgattttgaagatacagcctcg
gtggcgcacgaccttgaagtgggtctgactttcgccgagcaagtagtgtcagaagccaac
tcagttatcgtgatcatcgaccaggacggcaaagtgcatcgcttcaatcgcctgagcgaa
gagtacaccggccttcgtgagcaggacgtgattggccacagcgcctacgacatgtttatg
tcgatggaagaaggcatcgcctcgcgccagaacatcaccagcttctttcagaaagagcag
tcatacgaggtcgaacgctggattaacacggttaaaggccagcgcctgttcttatttcgc
aataaatttgtccacagcggcagcggcaaacagcagaaattccttatctgctccggctcg
gatatcaccgacgagcgcatggcacaggagcggctgcgggtcttagccaatacagacctc
atcaccggccttgccaaccgcaatgccctgcaagaccagctgaaaagcgcgctggaactg
cgcggcgacaaccaaatcggcctgatttacctcgacttagataacttcaagaaagtgaac
gatgcctacgggcatatgttcggcgatcgcctgctcaaagaggtggctcacgccatccag
agctgcttagacgaaaccgaaatccttgcgcggctgggcggcgacgaatttatcattctc
agcacccaagcctcggtcgagaaactcgaagccatcagccagcagatcttaggccggctc
aaagcccctttccgcattggtttaatcgaggtttataccggctgctccagcggcatcgcg
gtatgcccgcagcacgggaccgatgccgaaagcctgatccgtaacgccgacaccgccatg
tacgtggcgaaagaggcgggcaaaaacgcgcactgcgtcttctcgccggagatgaacaaa
aaagtctccgaatacatgtggctcgacaccaacctgagaaaggcgctggaagagcagcag
ttgcagctctattaccagccgaaagtctcaaataatggcgaagtgcgcagtgtcgaagcc
ctgctgcgctggcattcgccggagcgcggagtgatccagccacagagctttatctcctac
gccgaagagtccggcctgattgcgccgctagggaaatgggttatcgaaaccgccacccgt
caggcagccgagtggcagaagaaaggcttgaatttgcgggtggcggtgaacttgtctggc
cgccagttaaacagcagctcgctggtgtctgattttaccgaagcgatgcaaaaagtgggc
atgacccaatgcatgttggactttgagctgaccgaaagctgcctggtggaagatgaaaaa
gcggctgtcaccatgataaaccaactgcacaaactgggggcagaagtgcatctggacgac
ttcggcaccggctactcttccctgtcgcagctggcgcgcatcccactggattgcatcaag
ctggatcaaagctttgtacgcggtatcaaccataattcggtgtcgcaggcgctggtccgc
gcaattgtcgccgtggcaagaacgctgcaactcaccgtggtggctgaaggggttgaaact
catgaagaagagcggctaattgatgaaattggcgtggacagcaagcagggatacctgttt
gccaaaccaatgcccgccgatgagatcgagcactggcttgaacagaaagcaattgcttca
cccggtagtgtgaacaacgttactcgctag
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