Ewingella americana: GXP68_20400
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Entry
GXP68_20400 CDS
T06747
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
eame
Ewingella americana
Pathway
eame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXP68_20400 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eame03019
]
GXP68_20400 (rhlB)
Enzymes [BR:
eame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GXP68_20400 (rhlB)
Messenger RNA biogenesis [BR:
eame03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GXP68_20400 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QMV53431
LinkDB
All DBs
Position
4462490..4463788
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AA seq
432 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPLAVEALEKKGFHYCTPIQALALPITLAGRDVAGQAQTGTGKT
LAFLASTFHYLLSNPAAEGRQTNQPRALIMAPTRELAVQIHSDAEALSESTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYIDLSAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVKELAFENMNNAESIEIEPEQKTGHRIQEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDVWGHLAADGHRVGLLTGDVPQKKRLRVLE
DFTAGTLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGLSGHSISLA
CEEYALNLTAIETYTGHSIPVSKYNSDALLTDLPAPKRLARSRTGNNGQRRNSNSSSRRS
SAPRNNNRKRTG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttgaccgaacagaagttttccgacttcgccctgcacccgcttgca
gttgaagcccttgaaaagaaaggctttcattactgcactcctattcaggcattggcattg
ccaatcacgctcgctgggcgtgatgttgcaggtcaggcgcaaaccggtaccggcaagacg
ctggcttttctagcgtctactttccattatctgctttctaacccggctgctgaaggtcgt
cagaccaatcagccacgtgccttaatcatggcaccgacccgcgaattagcagtgcaaatt
cactcggacgccgaagcgctttccgagtccaccggtttgaaactggggctggcctatggc
ggcgacggttacgacaaacaattaaaagtattggaaagtggcgttgatatcctcatcggc
actaccggccgtttgattgattacgctaagcaaaactacatcgacttaagtgccattcag
gtggtagttctcgatgaagccgaccgtatgttcgatcttggctttatcaaagacattcgc
tggttgttccgccgcatgccgccggctaaccaacgccttaacatgctgttctcagcaacc
ctttcctatcgtgtgaaagagctggcgttcgaaaatatgaataacgccgagtcgattgaa
atcgaaccggagcagaagacaggtcaccgtattcaagaagagctgttctacccttcaaat
gaagaaaaaatgcgcctgctgcagacgctaattgaagaagaatggccagatcgctgcatc
atcttcgccaacaccaagcatcgctgtgaagacgtctggggccatctggctgccgatggt
catcgcgtaggtttgttgacaggtgatgtgccgcagaagaaacgcctgcgcgtgctggaa
gatttcacagcgggtacgctggatattctggtcgccaccgacgttgctgcgcgcggtttg
cacatcccagcggttacgcacgtattcaactacgacttgcctgacgactgtgaagactac
gttcaccgtattggccgtaccggccgtgctggcttaagtggtcactccatcagtctggcg
tgcgaagaatatgcgctgaacctgaccgcgattgaaacttacaccggacacagtattccg
gtcagcaaatacaatagcgatgccctgttgactgacttgcctgcaccaaaacgtttggcc
cgttcccgtactggaaacaacggtcagcgtcgcaacagcaactcttcatcacgccgcagc
agcgcgcctcgcaataataaccgtaaacgcacgggctga
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