Exiguobacterium antarcticum: Eab7_0027
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Entry
Eab7_0027 CDS
T02258
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta`
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ean
Exiguobacterium antarcticum
Pathway
ean03030
DNA replication
ean03430
Mismatch repair
ean03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ean00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Eab7_0027 (holB)
03430 Mismatch repair
Eab7_0027 (holB)
03440 Homologous recombination
Eab7_0027 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ean03032
]
Eab7_0027 (holB)
03400 DNA repair and recombination proteins [BR:
ean03400
]
Eab7_0027 (holB)
Enzymes [BR:
ean01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Eab7_0027 (holB)
DNA replication proteins [BR:
ean03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Eab7_0027 (holB)
DNA repair and recombination proteins [BR:
ean03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Eab7_0027 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
AFS69190
LinkDB
All DBs
Position
43079..44071
Genome browser
AA seq
330 aa
AA seq
DB search
MQTFHELGQTQSVIATILQNSLRANRINHAYIFTGDYEPLLLEAAQLFAKSLFCEHRDQI
EPCQTCRSCRRMDSGNLVDYYQIEPDGATIKKEQIQQLMHDLSLRGLEGDRQIYVVTQAH
KMTPQAANSLLKFFEEPGAGKVAILITNQPQLLLPTIRSRGQLLSFRPADRLLIGQVLSE
KTGRDSELTQLAARVYPKIEDAEQALIEDWFVNARGTVVQLMEELANRPADLPLFVQEKW
ISQFKNRQDARIGLELVTCFFEDVLHLKLNPSWEMITYANSRPLLEQMGGKSQTTITRWL
QAVLAAVKRIEANVNPQLTVERLMFDLQKG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagacattccatgaactaggacaaacacaatccgtcatcgcgacgattttacaaaat
tcactacgtgcgaatcggattaatcatgcttatatctttactggagactatgagccgctt
cttttggaggcggctcagttgttcgccaaaagtctgttctgtgaacatcgcgatcaaatc
gaaccgtgtcaaacgtgtcggagttgccgccggatggacagtgggaatctcgtcgattat
tatcaaatcgagccagacggagcgaccattaaaaaagaacagattcagcaactgatgcat
gacctctcattacgggggcttgagggagatcgacaaatctatgtcgtgacacaagcgcat
aagatgacaccacaagcagcaaatagcttattgaagttttttgaagagccgggtgctgga
aaagtggcaattttaattacgaatcaaccccagcttttgttaccaacgattcgttcgcgg
gggcaattactgagttttcgtcccgcagatcgtttgttgattggtcaagtcttgtctgaa
aaaacaggacgggacagcgaattaacgcaactggcagcacgtgtttatcctaaaatagaa
gatgcagagcaggcattaatcgaagactggtttgtaaatgcgcgagggacagtggtacaa
ttgatggaggaattagcgaatcgtccggccgatttacctttgtttgtccaggaaaaatgg
atcagtcaattcaagaaccggcaagatgctcggattggtctagaacttgtgacgtgtttt
tttgaagatgttctacatctcaaactaaatccgtcatgggaaatgatcacctatgcgaac
agccgaccattactggaacagatgggtgggaaaagtcagacgacgatcacacggtggcta
caagcagtactcgcagccgttaaacggatcgaagcaaatgttaatcctcaattaacagtt
gagcgtctcatgtttgacttacagaaagggtag
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