Exiguobacterium antarcticum: Eab7_0091
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Entry
Eab7_0091 CDS
T02258
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta`
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ean
Exiguobacterium antarcticum
Pathway
ean03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ean00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Eab7_0091 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ean03021
]
Eab7_0091 (rpoC)
03400 DNA repair and recombination proteins [BR:
ean03400
]
Eab7_0091 (rpoC)
Enzymes [BR:
ean01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Eab7_0091 (rpoC)
Transcription machinery [BR:
ean03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Eab7_0091 (rpoC)
DNA repair and recombination proteins [BR:
ean03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Eab7_0091 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AFS69255
LinkDB
All DBs
Position
115861..119433
Genome browser
AA seq
1190 aa
AA seq
DB search
MKIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWECYCGKYKRIR
YKGIICDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDMSPRALEEII
YFASYVVTDPGESTLEKKQLLSEKEYRAYREKFGSSFTAEMGAEAVRKLLRDVELEKEVA
GLREDLRMIQGQRRTRAIKRLEVLDAFRNSGNNPEWMVLEVLPVIPPELRPMVQLDGGRF
ATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGRRGRPVTGPG
NRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKEMALELFKPF
VMKELVSRGIAPNIKSAKRKIERVQPEIWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPT
LVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNILNPKDGKPVV
TPSQDMVLGNYYLTLERENAIGEGKTFSTVNEALIAYQNGYVHFHTRVAVPAGVLKNPTF
TEAQNEKLLVTTVGKLIFNEILPTTFPYLNEPSMNNLQEATPDQYFLERGTDVAAEIKSR
PIIEPFKKGFLGNVIAEVFKRFETTETSRMLDRMKNLGFKHSTRAGITVGIADIIVLPDK
QEILVEAQDNVDRVMKSYRRGLITEEERYERVVKSWNDAKDEIQSRLMKSLNRLNPIFMM
SDSGARGNASNFTQLAGMRGLMAAPSGRIIELPIKSSFREGLTVQEYFISTHGARKGLAD
TALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGIRVTALREGTEEIENLYDRLVGRTAF
EKVVHPETGAILVSTNELIDEDMAHVITDAGIDNVEIRTAFTCNTSHGVCKKCYGRNLAT
GNDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELFEARNPKGQA
VISEIDGQVIDFTESRDKRELTIQGLSETRTYTIPFGSRLRVQLGEEVIAGQVFTEGSID
PKELLNVKGVSGVQNYLLQEVQKVYRMQGVEIGDKHVEVMVRQMIRRVRVIESGETSLLP
GSLVDISTFKEACKEALRAGKALASAKPVLLGITKASLETDSFLSAASFQETTRVLTDAA
IKGKSDYLRGLKENVIIGKLVPAGTGMTRYRQIGLEIAGETPVEADSPVE
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcggcctcgcttcccctgaaaagatccgttcgtggtctttcggggaagtgaag
aagccggaaacgatcaactatcgtacgctcaagccagagaaagacggcttgttctgtgaa
cggatttttggtccaacaaaagactgggaatgttactgcgggaaatacaaacgaatccgt
tataaaggaatcatttgtgaccgctgtggtgttgaagtaacgaagtcgaaagtccgtcgt
gagcgcatgggtcacattgagcttgctgcaccggtttcgcacatctggtatttcaaagga
atcccaagtcgtatgggtctcgtccttgatatgtcaccccgtgcactcgaagagatcatt
tacttcgcgtcgtacgtcgtgacggatccgggcgaatcgacactcgagaagaaacaactc
ctttcagaaaaagagtaccgggcttaccgtgagaaattcggtagttcgtttacggctgaa
atgggtgcggaagcggttcgtaaattgctccgtgacgtcgaactcgaaaaagaagtagct
ggtttacgtgaagatcttcgaatgatccaaggacaacgtcgtacacgtgcgatcaaacgt
cttgaagtcttagatgctttccgtaactcaggcaacaatccggaatggatggttctcgaa
gtattaccagtcattccaccggaacttcgtccgatggtacagcttgatggtggacgtttc
gcgacgtctgacttaaacgatttgtaccgtcgtgtcatcaaccgtaacaaccgtctcaag
cgtcttcttgaccttggcgctccgaacatcatcgttcagaatgaaaaacggatgttgcaa
gaagcggttgatgccttgatcgataacggccgtcgtggtcgtccggtcacgggaccaggt
aaccgtccgttgaaatctctttcacatatgttgaaagggaaacaaggacgtttccgtcaa
aacttactcggtaaacgagtcgactattcaggtcgttcggttatcgtcgttggtccgaac
ctgaagatgtatcaatgtggtcttccgaaagaaatggcccttgaactcttcaaaccgttt
gtcatgaaagagcttgtctcgcgtggcatcgcaccaaacatcaagagtgcgaaacgcaaa
atcgaacgtgtccaacctgaaatttgggacgtgttagaagaagtcatccgtgagcatccg
gttctcttgaaccgtgctccgacccttcaccgtctcggtatccaggcgttcgaaccaaca
ctcgtcgaaggtcgcgcaatccgtcttcacccactcgtatgtacggcatacaatgccgat
ttcgatggtgaccaaatggcggttcacgtaccactttcagcagaagcacaagcagaagca
cgtcttctcatgctcgctgcacaaaacatcttgaacccgaaagacggtaagcctgttgtt
acaccatcgcaggatatggtcctcgggaactactacctgacgcttgagcgtgaaaacgca
atcggcgaagggaaaacattctcgacggtgaacgaagcgttgattgcctaccaaaatggg
tatgtccacttccacacacgtgttgctgttccggccggtgttctcaaaaacccgacattt
acggaagcgcaaaacgagaagttattggttacgacggtcggtaagttgatcttcaacgag
atcctcccaacgacgttcccatacttgaatgagccatcgatgaacaatcttcaggaagca
acgcctgatcaatacttccttgaaagaggaacggatgtcgctgctgaaatcaagagccgt
ccgatcatcgaaccattcaaaaaaggattcctcggaaatgtcattgcggaagtcttcaag
cgttttgaaacgactgaaacaagccgcatgcttgaccgcatgaaaaaccttggtttcaaa
cactcgacacgtgcgggtattacggttggtatcgcggatatcatcgtacttccggacaaa
caggaaatcctggtcgaagcacaagataatgttgaccgcgttatgaagtcatatcgccgt
ggtctcatcacggaagaagagcgctatgagcgtgtcgttaaatcgtggaatgacgcgaag
gatgaaattcagtctcgtctgatgaaatctcttaaccgtctgaacccgatcttcatgatg
agtgactctggtgcccgtggtaacgcatcaaactttacgcagcttgcagggatgcgtgga
ctcatggccgctccaagtggacggatcatcgagctcccgatcaaatcttcgttccgtgag
ggtctgacggttcaggaatacttcatctcgacgcacggtgcgcgtaaaggtcttgccgat
acagccttgaagactgccgattcaggttacctgactcgtcgtctcgtcgatgttgcgcaa
gatgttatcattcgcgaagatgattgtggaacggatcgtggtattcgtgtcacagcactt
cgtgaagggacggaagaaatcgaaaatctctacgaccgacttgtcggccgtacggcgttc
gagaaagtcgtccacccagaaacaggagcaatcctcgtttcaactaacgaactcatcgac
gaagatatggcacacgtgattacggacgccggtatcgacaatgttgagattcgtacagcc
tttacttgtaacacaagtcatggtgtctgtaagaaatgttacggacgtaaccttgcgact
ggtaacgacgtcgaagtcggcgaagcagtcggaatcatcgcggcacaatcaatcggtgag
ccaggaacgcagcttacaatgcgtaccttccacacaggtggtgttgccggagatgatatc
acacaaggtctcccgcgtatccaggagttgttcgaggcccgtaacccgaaaggtcaagcg
gtcatctcggaaattgatggacaagtcatcgactttacagagtcgcgtgataagcgtgag
ttgacgattcaaggtctgagcgaaacacggacatacacgattcctttcggatcacgtcta
cgtgttcaactcggtgaagaagtcattgctggtcaagtgttcacggaaggttcaatcgac
ccgaaagaactcttgaacgtcaaaggtgtatctggcgtacagaactatcttctccaagaa
gttcaaaaagtataccggatgcaaggggttgagatcggtgataagcacgtcgaggtcatg
gtacgtcagatgatccgtcgcgttcgtgtcatcgagtcgggtgagacttcactcttacca
ggttcgcttgtcgatatcagcacatttaaagaagcatgtaaagaagcgctccgtgccggt
aaagcactcgcttccgctaaaccagttctccttggtatcacaaaagcgtcgcttgagacg
gattcattcctatcagctgcttcgttccaggaaactactcgtgtccttacggatgcggcg
attaaagggaagagcgactaccttcgcggcttgaaagagaacgttattatcggtaaactt
gttccagctggtacaggaatgacacgttaccgtcaaatcggtctcgagatagcaggcgaa
acacctgtagaagcagattctcctgtagaataa
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integrated database retrieval system
