Exiguobacterium antarcticum: Eab7_0811
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Entry
Eab7_0811 CDS
T02258
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ean
Exiguobacterium antarcticum
Brite
KEGG Orthology (KO) [BR:
ean00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ean03019
]
Eab7_0811
03009 Ribosome biogenesis [BR:
ean03009
]
Eab7_0811
Enzymes [BR:
ean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Eab7_0811
Messenger RNA biogenesis [BR:
ean03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Eab7_0811
Ribosome biogenesis [BR:
ean03009
]
Prokaryotic type
rRNA helicases
Eab7_0811
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
CMS1
Motif
Other DBs
NCBI-ProteinID:
AFS69955
LinkDB
All DBs
Position
848533..849885
Genome browser
AA seq
450 aa
AA seq
DB search
MNGFSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPI
VQNVNPASQEMQAIIVAPTRELAWQIHEELKSILVKQPDYIKTSLITGGMDRERQIGRLK
VSPQIVIGTPGRILDLFKEQALKPHFVKHYVIDEADQMLDMGFLPEVDRIAQALPEKLQM
MVFSATIPEKLQPFLKKYMNNPRYAHVDPKQQTAKKIVHHTVPVKHRDRSDLALKLAKAL
NPYICLVFTNTKTEAIELEALFLEAGLNVGSLHGDLPARRRKQAIKEINEAKYQYVIVTD
LAARGIDISGVSHVINHGIPKDLDFYVHRVGRTGRVDQDGLAYTLFEDHENGSINRLEDR
GIEFTNVDVKSGQVSEVKERRRAKPNMKTAVSKTAHSRLSGEAAKAKKRVKPGYKKKHQY
KLKETAKRERIKEQRGVGRAERKANASKSK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatggattcagccattttgatttgcacccgttcgtcgtcgaagcactcgaagacgca
cgtattaaaaaaccaaccgatattcaatcccggatcattccggcagcgctcaaagggcgg
gatatcattggacaatcacaaactggaacaggaaaaacgttatcgttcctgttaccaatc
gttcaaaacgtcaatccagcgtcacaggaaatgcaggcgatcatcgttgcaccgacacgt
gaactcgcttggcaaattcacgaggaattgaaatcaatcctcgtcaaacaaccagactac
atcaaaacgagtctgatcacaggtggaatggaccgcgaacgtcaaattggacgtctcaaa
gtgtctccacaaatcgtcatcggaacaccgggccgcattttggatctgtttaaagagcaa
gccttgaaaccacatttcgtcaaacattatgtcattgatgaagcggatcaaatgctcgat
atgggattcttaccagaagtcgaccggattgcgcaagctctcccagagaaattgcaaatg
atggttttctcagcaacgattccagagaaactgcaaccgttcttaaaaaaatacatgaac
aacccacgttatgcacatgtggatccaaaacaacagacagctaagaaaatcgtccatcat
accgttcctgtcaaacaccgtgatcgttctgatttggcattgaaactggcaaaggcgctt
aacccgtatatctgtcttgtctttacgaatacaaaaacagaagcaattgaacttgaagcc
ctcttccttgaagcgggactcaatgtcggttcgcttcacggtgacttaccggcacgccgt
cggaaacaagccatcaaggaaatcaatgaagcgaagtaccaatacgtcatcgtgacggat
cttgcagcgcgtggtattgatatctcaggtgtctcgcatgtcatcaaccatggtattcca
aaagatcttgatttttatgtacaccgcgtcggacggacaggtcgtgtcgaccaagacggt
ttggcttacacgctattcgaagaccatgagaatggttcaatcaaccgcttagaggatcgt
ggcattgaatttacgaacgtcgatgtgaaaagcggtcaagtcagcgaagtcaaagaacgc
cgccgtgctaaaccaaacatgaagacagccgtttcgaaaacagcacacagtcgtttatct
ggtgaagctgcaaaagcgaaaaaacgcgtaaaaccaggttataaaaagaaacaccagtat
aagctgaaagaaacagcaaaacgcgaacgcatcaaggaacaacgtggagttggtcgtgcc
gagcgtaaggcgaatgcaagcaaatcaaaataa
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