Exiguobacterium antarcticum: Eab7_1089
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Entry
Eab7_1089 CDS
T02258
Name
(GenBank) Hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ean
Exiguobacterium antarcticum
Brite
KEGG Orthology (KO) [BR:
ean00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ean03016
]
Eab7_1089
Enzymes [BR:
ean01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Eab7_1089
Transfer RNA biogenesis [BR:
ean03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Eab7_1089
Prokaryotic type
tRNA splicing ligases
Eab7_1089
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
SpoIISA_toxin
Motif
Other DBs
NCBI-ProteinID:
AFS70230
LinkDB
All DBs
Position
1122726..1123916
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AA seq
396 aa
AA seq
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MKTIRGKYGEAKIFTHNVDDTTIEQVTGMLNENIAVGGDVRIMPDCHAGKGSVIGTTMRI
HDKVVPNLVGVDIGCGMLCTQINREGTAGVDYEKLDAAIQALVPSGMSVRSQPHRLAEQI
PFDQVLAPFNETRARLSIGTLGGGNHFIELNTDEEDNLYLVIQECSRNLGKTIAEHYQKL
AEASQFTVDTESIVASLKEQGREQDIQTTLVELKSQFNETNKDLAYVSGSDMDNYLHDLK
IAQRYAALNRQAMTDVIVEAMGWSVTEQFDTIHNYIDLEQMILRKGAISAQAGEVAIIPM
NMRDGSLIVKGKGNPDWNYSAPHGAGRIMSRSKAFKSVDLKEFEATMQDVWSSSVVESTR
DESPFVYKPMEEIIRNTMDTVELLQVIKPLYNFKAK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgattcgcggaaagtacggcgaagcgaagatttttacacacaatgtcgatgac
acgacgattgaacaggtgaccgggatgctgaacgaaaacattgctgtcggcggcgatgtc
cgaatcatgcccgattgtcatgccggcaagggctcggtcatcggaacgacgatgcggatt
cacgataaggtggttccgaatctcgtcggtgtcgacatcggctgtgggatgttatgtaca
caaatcaaccgtgaaggaacagccggcgtcgattatgagaagttggatgctgcgattcag
gcactggttccgagtggcatgtccgtccgcagtcagccgcaccggttggcggaacagatt
ccgtttgaccaagtgttggcaccgtttaacgaaacgcgggcccgattgtcgattggtacg
ttaggcggcggtaatcactttattgagctgaacacggacgaagaggacaacctctacctc
gtgattcaggaatgcagccggaacctcgggaaaacgattgccgaacattatcaaaagttg
gcggaagcgtcacaattcaccgtcgatacggagtcgatcgtcgcatcgctgaaagaacag
ggacgggagcaggacattcaaacaacgttggtcgagctgaagagtcaattcaatgaaaca
aataaagatttagcgtacgtgtccggttccgatatggacaactacctgcacgacttaaaa
atcgctcaacgctacgcggcactgaaccgtcaagcgatgaccgacgtcattgttgaagcg
atgggctggtcggtcacggaacagttcgatacgatccataattacatcgatctcgagcag
atgattctccggaaaggtgcgatttcggcgcaagccggtgaagttgccatcattccgatg
aacatgcgcgacggttcactgatcgtcaaaggaaaaggcaatccggactggaactattcg
gcaccacacggggcaggacggatcatgtcccgttcgaaagcctttaaatccgttgatctg
aaagagtttgaagcgacgatgcaggacgtctggtcgagctccgtcgtcgaatcgacgcgt
gatgagtcaccgttcgtctacaaaccgatggaagaaatcatccggaatacgatggatacg
gtcgagttactccaagtcatcaagccgctctataactttaaggcgaagtaa
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