Exiguobacterium antarcticum: Eab7_1678
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Entry
Eab7_1678 CDS
T02258
Name
(GenBank) Ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ean
Exiguobacterium antarcticum
Pathway
ean03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ean00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Eab7_1678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ean03019
]
Eab7_1678
Messenger RNA biogenesis [BR:
ean03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Eab7_1678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AFS70787
LinkDB
All DBs
Position
complement(1635719..1637383)
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AA seq
554 aa
AA seq
DB search
MSKKKTEKVSVFALGGAGEIGKNMYVVELDEDIFVIDAGLMFPGDEMLGIDKVIPDISYL
KENKERIQGIFITHGHEDHIGALSYVLRDLKVPVYGTRLTLGLIEIKLKEAGLLKKADLR
PIDAKTKLTVAGHFITFFRVNHSIPDAVGVCIQTSQGAIVHTGDFKFDYTPVDGKQADFG
KIAAIGQRGVLCLLSDSTNAERPGMSGSESTVGSELNDVIYEAPGRVIVASFASNVHRLQ
QVFAAAEVNNRKVAVVGRSMVNIVEVAQRLNYLRFKQKTLVELSEINRLDDNQVVILTTG
SQGEPMAALTRMARNAHKQVNIRLNDTVVVAASPIPGNEKSVSKTIDLLFRAGANVIYNQ
RKVHVSGHGHAEDLKLMLNLIKPKFFIPIHGEFRMQKAHSRLAQTVGVNANNIFIIENGD
VVEFEKRKARMSRKVNAGNVLIDGIGVGDVGNIVLRDRRLLSQDGVVLCVITISRKNKTI
VSGPEIISRGFVYMRESEDMINEANRIVAKQLQGKLTGELDWTEMKSLIRDKLSSYLYEQ
TKRRPMILPIIMEI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagaaaaagacggaaaaagtaagcgtctttgctcttggtggagccggtgaaatc
ggtaagaacatgtacgtcgtcgaactcgacgaggacatcttcgtaatcgatgccggatta
atgttcccaggagacgagatgcttggaatcgacaaagtcattccagacatcagttattta
aaagaaaacaaagaacgcattcaagggattttcattacccacggtcatgaagaccatatc
ggtgcgctcagttacgtcttacgtgacttaaaagtaccggtctacgggacacgtttgaca
cttgggttgattgaaatcaaattaaaagaagccggtttattgaagaaggcagatcttcgt
ccaattgatgccaagacgaaattaaccgtagcgggtcatttcattaccttcttccgtgtg
aaccattcgattccggatgcagtcggggtatgtatccagacatcacaaggcgcaatcgtg
catacaggtgactttaagtttgattacacacctgtcgatgggaaacaagccgacttcggg
aaaatcgcagccatcggtcaacgtggggtgttatgtctcttatccgactcaacgaatgcc
gagcgtccggggatgtccggatcagaatcgacagtcggttctgagttaaatgatgtcatt
tacgaagcaccaggtcgtgtcatcgttgcatcgtttgcgtcaaacgtccatcgcttgcaa
caagtgtttgctgcggctgaagtcaacaatcgtaaagtcgctgttgtcggccgaagtatg
gtcaacatcgtagaagttgcccaacggttaaactacttacggtttaagcaaaaaacatta
gtcgaattgtcggaaatcaatcgcctggatgacaaccaagtcgtgattctgacgaccggt
tcgcaaggtgaaccgatggcagccctcacacgaatggcacgtaatgcgcacaaacaagtc
aacattcgtctgaatgatacggttgtcgtcgcggcgtcgccgattcccggaaatgagaag
tcggtctcgaaaaccatcgatttgttattccgtgcgggagccaacgtcatttacaaccaa
cggaaggttcacgtctcaggtcatggtcacgcagaagatttgaaattgatgctgaacttg
atcaaaccgaagttcttcatcccgattcacggtgaattccggatgcaaaaagcacatagc
cgattagcacaaacggttggtgtcaatgcgaataacattttcatcatcgaaaatggggat
gtcgttgagtttgagaagcgcaaagcacggatgtcgcgtaaagtgaatgccggaaacgtc
ttgattgatggaatcggtgtcggcgatgttggaaatatcgtcttacgtgatcgtcgtctc
ttatcacaagatggggtcgtactttgtgtcatcacgatcagccgtaagaataaaacgatt
gtctcaggaccagaaatcatctcacgcggatttgtttatatgcgtgagtcagaagatatg
atcaatgaagcaaaccggattgttgcgaaacaattgcaagggaaattgacaggggagctg
gattggacagaaatgaagtccttgattcgtgataagttgagttcttatctatacgagcag
acgaaacgtcgtccaatgatcttaccgatcatcatggaaatttaa
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