Exiguobacterium antarcticum: Eab7_1683
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Entry
Eab7_1683 CDS
T02258
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ean
Exiguobacterium antarcticum
Pathway
ean03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ean00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Eab7_1683 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ean03019
]
Eab7_1683 (pnp)
03016 Transfer RNA biogenesis [BR:
ean03016
]
Eab7_1683 (pnp)
Enzymes [BR:
ean01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Eab7_1683 (pnp)
Messenger RNA biogenesis [BR:
ean03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Eab7_1683 (pnp)
Transfer RNA biogenesis [BR:
ean03016
]
Prokaryotic type
tRNA degradation factors
Eab7_1683 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
RNase_II_C_S1
OB_RRP5_4th
SPATA25
sCache_like
MIOX
Motif
Other DBs
NCBI-ProteinID:
AFS70792
LinkDB
All DBs
Position
complement(1642300..1644519)
Genome browser
AA seq
739 aa
AA seq
DB search
MSQTKQTFSTELGGRPLTIEIGQLAKQANGAALIRYGETAVLATVVASKQPKDLDFFPLT
VNYEEKLYAAGKIPGGFLKREGRPGENAILTSRLIDRPIRPLFPDGFRHDIQVATTVLSS
DEDNSPEVAAMIGASIALSISDIPFDGPIAGVTIGRVDGAFIINPSLSQAAASDIDLQVA
GTKHAVNMVEAGAKEVSEEAMLEAILLGHDVIKTLIAFQEEIVAAVGKEKFAYTVSSFDE
TLVSRLKTEALAEVTAAVQVEEKQARDLAINEVISKYIDQYAADDSITEAQLAEVSGVLN
KFVKTEVRRLITEDKVRPDGRGLAEIRPLDSEIGLLPRAHGSGLFTRGQTQVLSVATLGV
AGDAQIIDGLGLKAEKRFMHHYNFPPFSVGEARPMRAPGRREIGHGALGERALLPVLPSE
TDFPYTIRLVSEVLESNGSSSQASICGSILAMMDAGVPLKAPVAGIAMGLIKEGENYSIL
TDIQGMEDHLGDMDFKVAGTKDGVTALQMDMKIGGITRQILEEALEQARLGRLHILEHMN
SVIAEPRVELSKYAPKIVTLKINPDKIRDVIGPGGKVINSIIDETGVKIDIDQDGTVFIA
STDQDGINRARQLIEDIVREVVIGEEFDGTVRRVEKLGAFVELFKGKDALVHISELALER
VGQTEDVVKLGDKLKVRVTEVDDKGRVNASHKVLLVEGMNAEDRAAYDEKKKTERDNRPP
RRDTGSRPPRDGQRPPRRN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacaaaacagacgttttcgaccgaactcggtggacgtcctttaacaattgaa
atcggtcaactggccaaacaagcgaacggagcagctttgattcgttatggtgagacagca
gttcttgcgacggtcgttgcgtcaaaacaaccaaaagacttggatttcttcccattaaca
gtgaactatgaagaaaaattatatgcagcaggtaagattcctggtggtttcttaaaacgt
gaaggacgtccaggtgaaaacgcgattttgacgtcacgtttgatcgaccgtccgattcgt
ccattgttcccagacggtttccgtcatgacattcaagttgcgacgacggtcttatcgtca
gacgaagataactcaccggaagtagccgcgatgatcggggcatcgattgccctgtcgatt
tcagacattccatttgatggtccgattgcaggtgtcacgattggtcgtgtcgatggtgca
ttcatcatcaatccgtcattaagtcaagcggctgcaagtgatatcgaccttcaagtagca
ggaacaaaacacgcggtcaacatggttgaagcgggtgcaaaagaagtatcggaagaagcg
atgctcgaagcaatcctcctcggacatgatgtcatcaagacattgattgcgttccaagaa
gaaatcgtcgcagcagtcggcaaagaaaaattcgcctatacggtgtcttcatttgacgag
acgcttgtctctcgcctgaaaacagaagcacttgcagaagtgacggcagcggttcaagtc
gaagaaaaacaagcacgtgatctcgcgatcaacgaagtcatttcgaaatacatcgatcag
tatgcagcagatgattccatcacggaagcacaattagcagaagtttcaggtgtcttgaat
aaattcgtcaaaacagaagtccgtcgattgatcacagaagataaagtccgtccagatgga
cgaggacttgctgagattcgtccactcgattcagaaatcggattgttgccacgtgcacac
ggttcaggtctgttcacacgtggtcaaacacaagtcttgtctgtcgcaacactaggtgtc
gcaggcgatgctcaaatcatcgatggtctcgggttgaaagctgaaaaacgattcatgcat
cattacaacttcccaccgttctcagtcggagaagcacgtccgatgcgtgcaccgggccgc
cgggaaatcggacacggagctcttggtgagcgcgccttgttacctgttttaccgtcagaa
acagatttcccgtatacgatccgcctggtatcagaagtacttgaatcaaacggatcgtct
tcacaggcatcgatctgtggatcgattcttgcgatgatggatgccggtgtccctcttaaa
gcaccagttgcaggtatcgcgatgggcttgatcaaagaaggcgaaaactactccatctta
accgatatccaaggaatggaagaccatctcggcgatatggactttaaagtggctggtaca
aaagatggtgttaccgctcttcaaatggatatgaagattggtggtatcacgcgtcaaatc
cttgaagaggcactagagcaagcacgtctcggtcgtttacacatcttggaacacatgaat
tcagtgattgctgaaccacgtgtcgagttgtctaaatatgcaccaaaaatcgtcacactc
aaaatcaatccggataaaatccgtgatgtgattggacccggcggtaaagtcatcaatagc
atcatcgatgagacaggggttaagatcgatatcgatcaagacggaaccgtcttcatcgca
tcaacggatcaagacggcatcaatcgtgcgcgtcagttgattgaagacatcgttcgtgaa
gtcgtcatcggtgaagaatttgacggaacggttcgccgcgtcgaaaaactcggagcgttc
gtcgaattgtttaaaggaaaagatgcccttgtgcatatctcggaactagcgcttgagcgt
gtcggccaaaccgaagatgtcgtcaaactaggcgacaaattgaaagtccgcgtcacggaa
gttgatgacaaaggtcgtgtcaatgcttcgcataaagtacttcttgttgaaggtatgaat
gctgaagatcgtgccgcatatgatgaaaagaaaaaaacagagcgtgacaaccgcccgccg
cgtcgggatactggatctcgcccaccacgtgacggacaacgtccaccacgtcgtaactaa
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