Exiguobacterium antarcticum: Eab7_1739
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Entry
Eab7_1739 CDS
T02258
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ean
Exiguobacterium antarcticum
Brite
KEGG Orthology (KO) [BR:
ean00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ean03032
]
Eab7_1739 (topA)
03400 DNA repair and recombination proteins [BR:
ean03400
]
Eab7_1739 (topA)
Enzymes [BR:
ean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Eab7_1739 (topA)
DNA replication proteins [BR:
ean03032
]
Prokaryotic type
DNA Topoisomerases
Eab7_1739 (topA)
DNA repair and recombination proteins [BR:
ean03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Eab7_1739 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Lar_restr_allev
Toprim_3
HypA
Zn_ribbon_5
Motif
Other DBs
NCBI-ProteinID:
AFS70847
LinkDB
All DBs
Position
complement(1694754..1696850)
Genome browser
AA seq
698 aa
AA seq
DB search
MAKYLVIVESPAKAKTIKRYLGSNYTVKASMGHVIDLPKSQMGVDVEHDYEPKYITIRGK
GPVLKELKTAAKKAQKIYLAADPDREGEAIAWHLAKALGVDESTECRVVFNEITKDAIKD
SFKRPRKINYDLVDAQQARRILDRLVGYSMSPLLWKKIKKGLSAGRVQSVAVKMIIDREQ
EINAFLPEEYWTIKLELDANGEKLEANFYGIDGKKRELHSEEEVNEVLAKLSQSFTVDSV
TKKERRRNPALPFTTSSLQQEAARKLNFRAKKTMMIAQQLYEGIELGKEGTVGLITYMRT
DSTRTSETANVEAHGFIENAYGKEYIAVEKRKEKKAANSQDAHEAVRPTSTMRDPQLVKS
YLSRDQFRLYKLIWERFVASQMAPAILDTVKVDLLSNDVMFRANGSTVKFAGFMKVYIED
TDDEAVTDVKDGLLPPLDDGEVLQQETIEPKQHFTQPPPRYTEARLVRSMEELGIGRPST
YAPTLDTIQKRGYVTLEEKKFLPTELGELVIDMISDYFQEFITVQFTADMEALLDAIEKG
DMQWTEVVDPIYKSFAKRLTRAEAEIEKIEIKDEPAGEDCEVCGHAMVIKMGRYGKFMAC
SNFPECRNTKPIQVEIGVKCPTCGTGEIVERRSKKGRLFYGCSNYPECEFVSWDKPVEEP
CPVCSSMMVQKKIKNGVKVECTSCGHHETRIDQEQEEE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatatctagtaattgtcgaatcacctgcaaaggcaaaaaccatcaaacgttat
ctcggttcgaactataccgtgaaagcttcgatggggcatgtcatcgatttgccaaaaagc
caaatgggtgttgacgtagaacatgactatgaaccaaagtatattacgattcgtggtaaa
ggaccggttttaaaggaattgaaaacggccgctaaaaaagcacaaaaaatttatctcgcg
gccgaccccgaccgtgaaggggaagcaatcgcatggcacttagcgaaagccctcggcgtc
gatgagtcgacggaatgtcgggtcgtctttaatgaaatcacaaaagatgccatcaaagat
tcgttcaagagaccccgcaagatcaactatgatcttgtcgatgcacaacaggcacggcgt
atcttggaccgtctagttggttatagcatgagtccgttactttggaaaaaaatcaaaaaa
ggattgtctgcaggacgcgttcaatccgttgccgtgaagatgatcatcgatcgcgagcag
gaaatcaatgcctttttaccagaagaatattggacgatcaaattagagttagatgcgaac
ggtgaaaagttagaagcaaacttttatgggattgatgggaaaaaacgtgaattacactcg
gaagaagaggtcaacgaagtgttggctaaactgtcgcaatcgtttacggttgattccgtg
acgaaaaaagaacgtcgccgtaatccagcattgccgttcacgacgagttcccttcagcaa
gaagcagcacgtaagttaaatttccgggcgaagaagacgatgatgattgctcagcaatta
tatgaaggaatcgagcttggaaaagaagggacggtcggtctgattacgtatatgcggaca
gactcgacacggacatctgaaacagcgaacgtcgaagcacatggattcattgaaaatgcg
tacggaaaagaatacatcgcggttgaaaaacgaaaagagaaaaaagcagcgaattcgcag
gatgcccacgaagctgttcgtccgacttcgacgatgcgcgatccgcaactcgtcaaatcg
tatctctcgcgtgatcaattccgattatacaaattgatttgggaacggttcgtcgcaagc
caaatggcaccggcgattttagatacagtcaaagtcgaccttctctcaaatgatgtgatg
ttccgcgcgaacggttcgacggtcaagttcgcaggattcatgaaagtatacatcgaggat
acggatgatgaagcagtaacagatgtcaaagacggattgttgccaccgcttgacgatgga
gaagtgttgcaacaagaaaccatcgaaccaaaacaacactttacgcaaccgccaccccgt
tatacggaggcgcgtctcgtccggtcgatggaagaacttgggatcggtcgaccgtcgacg
tatgccccgacactcgatacgattcaaaaacgcgggtatgtcacgctggaagagaaaaaa
ttcttgccgacggaacttggtgaacttgtcattgatatgatcagtgattatttccaggag
ttcatcaccgtccagtttacggccgacatggaagctttactcgatgccattgaaaaaggt
gacatgcagtggacagaagtcgtcgatccgatttataaatcgtttgcaaaacggttgact
cgagcagaagctgaaatcgagaagattgaaatcaaagatgagccagcaggggaagattgt
gaagtctgtggccatgcgatggtcatcaagatggggcgttacggtaagttcatggcgtgc
tcaaacttcccggaatgtcgcaacacaaaaccgattcaagtcgagattggtgtgaagtgt
ccgacatgtgggacaggtgaaatcgttgaacgacggagtaaaaaaggacgcctcttctac
gggtgttccaattatccggaatgtgagttcgtctcatgggataagccggtcgaagaacct
tgtccggtctgtagcagtatgatggtacaaaagaaaatcaagaacggtgtgaaagtagaa
tgtacgtcttgcggacatcatgaaacacgcatcgatcaggagcaagaggaggaatga
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