Exiguobacterium antarcticum: Eab7_2783
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Entry
Eab7_2783 CDS
T02258
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ean
Exiguobacterium antarcticum
Pathway
ean03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ean00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Eab7_2783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ean03019
]
Eab7_2783
03009 Ribosome biogenesis [BR:
ean03009
]
Eab7_2783
Enzymes [BR:
ean01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Eab7_2783
Messenger RNA biogenesis [BR:
ean03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Eab7_2783
Ribosome biogenesis [BR:
ean03009
]
Prokaryotic type
rRNA helicases
Eab7_2783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AFS71864
UniProt:
K0AFC9
LinkDB
All DBs
Position
complement(2741749..2743194)
Genome browser
AA seq
481 aa
AA seq
DB search
MSKKPFTDFQLSAPILEAIEQLGYHTPTDVQQAVIPVALSEKDIIVKSRTGSGKTASFGI
PLCELIEWEENKPQALILTPTRELALQVTEDVMNIGRYKRIKATAVFGKQPFRGQVAELK
QKTHIVVGTPGRVLDHLERGTLSLEKVKYLVLDEADEMLNMGFLDQVDTILKQLPKQRTT
MLFSATFPQDIHQLSDRYMQAPKEVEIMTKATEIAEIEHSYISVTDKTKFAILKDVTVVE
NPDRCMIFCRTKEHVDFVAQGLTAMEYPVEKIHGGMEQDERLAVMKAFRAGEFRYLVATD
VAARGIDIENITHVIQYDMPVEKESYVHRTGRTGRAGALGKAISLVTESDMRRLREVEQY
RGEAIEKRQAPTERELIRTADAFEEKITTADVRASKTEQLNADIMKLYFNGGKKKKLRAV
DFVGTIAKIEGMTAQDIGIITIQDTVTYVEILNGKGPLVLRAMKTTKVKGKQLKVYEAFK
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaaccattcaccgattttcaactcagtgcacccatcctagaagcaatcgaa
cagctcggttaccatacaccgaccgatgtccagcaagcggtcatcccggtcgccttatcc
gaaaaagatatcatcgtcaaatcacggaccggtagcgggaaaacggcatcgttcgggatt
ccgctttgtgaactgatcgagtgggaagaaaataaaccacaagcgttgattttgacacca
acccgcgaacttgcgctgcaagtcacggaagacgtcatgaacatcggacgttataaacgc
atcaaggcgacggctgtcttcggtaaacagccattccgaggtcaagtcgcggaactcaaa
caaaagacgcacatcgtcgtcggtacaccaggtcgtgtcctcgatcatttagagcggggg
acattatcgcttgagaaggtcaaatacctcgtccttgatgaagcggacgagatgcttaat
atgggcttcctcgatcaagtcgatacgattttgaagcaattaccgaagcaacggacgacg
atgttgttctcagcgacgttcccgcaagatattcatcagttaagtgaccgctacatgcag
gcaccaaaggaagtcgaaatcatgacgaaggcaaccgaaatcgcagaaatcgaacacagt
tatatttctgtgaccgacaaaacgaagttcgccatcctgaaagatgtcacggtcgttgaa
aatccagaccgttgcatgattttctgccgaacaaaagaacatgtcgattttgtcgcacaa
ggattaaccgcgatggagtatccggtcgaaaaaattcatggtggtatggaacaggatgag
cgtcttgccgtcatgaaagcgttccgagcaggtgaattccgttatctcgtcgcgacggat
gtcgcagcacgggggattgatatcgaaaacatcacccatgtcatccaatacgatatgccg
gtcgaaaaagaaagttatgttcaccggacaggccggacagggcgtgccggtgcactcgga
aaagccatcagtttagtgacagagtcggacatgcgtcgtctgcgtgaagtcgaacaatac
cggggtgaggcgattgaaaaacgccaggcaccgactgaacgggaattgattcggacggca
gatgcctttgaagaaaaaatcacgacggcagatgtccgggcgtcaaaaacagagcagctt
aatgcggatatcatgaagctgtattttaacggcgggaagaaaaagaaactgcgtgccgtt
gattttgtcggaacgattgcgaaaatcgaaggcatgaccgctcaagacatcggaatcatc
acgattcaggataccgtcacatacgtggaaatcctgaacggaaaaggtccactcgtcttg
cgggcgatgaagacgacgaaagtcaaaggtaaacagttgaaggtgtatgaagcgttcaaa
aaataa
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