Elizabethkingia anophelis NUHP1: BD94_0185
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Entry
BD94_0185 CDS
T03235
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
eao
Elizabethkingia anophelis NUHP1
Pathway
eao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BD94_0185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eao03021
]
BD94_0185
03019 Messenger RNA biogenesis [BR:
eao03019
]
BD94_0185
Transcription machinery [BR:
eao03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BD94_0185
Messenger RNA biogenesis [BR:
eao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BD94_0185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA_25
AAA_22
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AIL43960
UniProt:
A0A077EEQ2
LinkDB
All DBs
Position
190336..192069
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AA seq
577 aa
AA seq
DB search
MFDIESLKSKSDTELTKISKDLGIGVKKTSDINEKIYAILDFQASNPQTIKDYLGPQDKG
NDAGNEGAAQPKKRGRKPAAKAEVVKTTEETAKPEAPVKEARKKVEAPKAEVPVEEATKV
TEETSQPEKKQRKRVTKAPQPAEAKTTPEEKAPEASESAEVVAPAKKETQAVPQQKNNNQ
NRQHHHNKERNNGDVKNSEPQKKEYSFDGIVTVEGVLEILPDNYGFLRSSDFSYISSPDD
VYVSTSQIKNYGLKTGDTVKGIVRLPKEGEKYFSLQRPTEVNGRDLAYIKDRVAFEFLTP
LFPQEKFNLAGKNATLSTRIVDLFAPIGKGQRAMIVAQPKTGKTMLLKDIANSISANHPE
AYMMVLLIDERPEEVTDMQRSVNAEVIASTFDEAADKHVKVANLVLSKAQRLVECGHDVV
ILLDSITRLARAYNTVTPASGKILSGGVDANALHKPKRFFGAARKIEGGGSLTIIATALI
DTGSKMDEVIFEEFKGTGNMELQLDRKIANKRIYPAVDLISSSTRRDDLLHDEVTQQRMW
IMRKYLADMNPVEAMEFVKKHMQSTVNNEEFLMSMNK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacattgaaagtctaaagtcaaaatcggataccgaattgacgaaaatctcaaaa
gatttaggtattggtgtgaagaaaacttccgatattaacgaaaagatttacgctatattg
gattttcaggcatccaacccccaaacgattaaggattacctcggaccacaggataaagga
aatgatgccggaaatgaaggagctgcacaacctaagaaaagaggaaggaagcctgctgct
aaagctgaagtggtaaagactacggaagaaaccgctaagcctgaagcgcctgtaaaagag
gccagaaagaaagtagaggctcctaaggctgaagttcctgtagaggaagctactaaagtt
accgaagaaactagtcagccagaaaaaaagcaaagaaaaagagttacaaaagctccacag
cctgcagaggcaaaaacaacgccggaagaaaaagctccggaagcttcagaatctgctgaa
gttgtggctcctgccaaaaaagaaacacaagctgttcctcagcaaaaaaataataatcag
aacagacaacatcaccataataaggaaagaaataatggagatgtaaagaattctgaacct
cagaagaaggaatatagcttcgatggtattgtaaccgttgaaggagttctggaaattttg
ccggacaattatggtttccttagatcctcagactttagctatatctcgtctcctgatgat
gtatatgtatctacaagtcagatcaagaactatggattaaaaaccggtgatacggtaaaa
ggtattgttcgtttaccaaaagaaggagagaagtatttctctttacaacgtcctacagaa
gttaacggaagagatcttgcttatattaaggatagagtagcgttcgaattcctaacgccg
cttttcccacaggagaaatttaacctggctggaaaaaatgcaacactttcaaccagaatt
gtagacctttttgcacccattggtaaaggtcagcgtgctatgattgtagcacagcctaaa
acgggtaaaacaatgctgttgaaagatattgccaatagtatttcggcaaatcatccggaa
gcttatatgatggtcttactaattgatgaaagacccgaagaagttaccgatatgcagaga
agtgtaaatgcagaagttattgcatctacgttcgatgaagctgccgacaagcatgtaaaa
gttgccaatctggtattgtctaaagctcaaagacttgtagaatgtggtcatgatgttgta
attcttctggattccattacacgtttagcaagagcttataatactgttacccctgcatcc
ggaaagatactttctggtggtgtggatgcgaatgcattgcacaagccaaagagattcttt
ggtgcagctagaaaaattgaaggcggaggttctttaactattattgcaactgcattaatt
gatacaggatctaaaatggacgaagtgatctttgaagaattcaaaggaacgggtaacatg
gaacttcaattagacagaaaaattgctaataagcgtatttatcctgctgtagaccttatc
tcttccagtacacgtagagatgatttgttacatgacgaggttacccagcaaagaatgtgg
attatgcgtaaataccttgctgatatgaaccctgtagaagcaatggagtttgtgaaaaaa
cacatgcagtctactgtaaataatgaagaattcttaatgtccatgaacaaatag
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