Elizabethkingia anophelis NUHP1: BD94_0411
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Entry
BD94_0411 CDS
T03235
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eao
Elizabethkingia anophelis NUHP1
Pathway
eao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BD94_0411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eao03019
]
BD94_0411
03400 DNA repair and recombination proteins [BR:
eao03400
]
BD94_0411
Enzymes [BR:
eao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BD94_0411
Messenger RNA biogenesis [BR:
eao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BD94_0411
DNA repair and recombination proteins [BR:
eao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BD94_0411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
DnaD_N
GntR
zf-CXXC
Rrf2
HTH_36
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIL44186
UniProt:
A0A077E9D1
LinkDB
All DBs
Position
432575..434476
Genome browser
AA seq
633 aa
AA seq
DB search
MIPSRSYNEEILDQTLKQFWGYDHFRDQQKEIIRSVLSSNDTLALLPTGGGKSLCYQLPS
LLLEGATVVISPLLALMKEQVHELNLRGIPAAYLSSEFDDEQEELIYQNLKNEEYRLLYV
SPERLSNRNFLENIADAKISLIAVDEAHCISEWGSDFRPSYQNIKDFRQMYPYLPCLALT
ATASVKVMQEIQQKLDFKKTNIFKKSYRRDNLYIQLRELSDKYNHILYYLRSNEKSGLIY
VRTRKEAEYLSNWLKISGIEQVDYYHAGLPVKEKQIRQNYWLSKNNYTLVSTNAFGMGID
KDDVGFVIHLSPSPSIENYYQEIGRAGRNGQNAETILLWNQSELTQIDDLIKSQLASKTD
YQKVCSYVYSFCQVAEHELPEGFFEIQTNKIQNLTKISRPKIVSILRFLHNQEIIYLKES
KGMSSLELKFDISEVESLGKKDSFFVEKLSRALDGVATHRTYFREKKLTDKMNVDEQTIR
VRLRELHEKGLVDYFDGNSAGIRFLMPRNDKELQNRYWNLFASIQKNKMQKWEEMKYFIR
DTSYCKMRLILSYFGEKETQNCGKCSYCLTSKTGTSDREYKKIIFEALMRSPMTLDELAV
HLKFYPKDELLEHLKILLDRGQVRMLNYKTYTL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgattccgagccgatcttataatgaagagattttagatcaaacccttaagcaattttgg
ggttatgatcattttagagatcagcaaaaagaaattatccggtctgtcttatcctccaat
gatacattagctttactacctacaggaggagggaaatctttatgctaccaattaccatct
ttgcttttagaaggtgctacagtagtaatatctccgcttctggctttaatgaaagagcag
gttcatgagcttaatctaagaggtattcctgctgcctatcttagttccgaattcgatgat
gaacaagaagagcttatttatcagaatctcaagaatgaagaatataggctgctttatgtt
tccccggaaagattatccaacaggaattttctggaaaatattgcggatgccaaaatctcg
cttattgctgtagacgaagctcattgtatttcggaatggggaagtgattttcgcccgagt
tatcagaatataaaggatttcagacagatgtatccatatcttccgtgtctggcattaaca
gcaactgcttctgttaaagttatgcaggaaattcagcaaaaactggacttcaaaaagaca
aatattttcaaaaagtcttacaggagagataatctttatatccagctgagagagctttca
gataagtataatcatattctgtattatctcagaagtaatgaaaaatcgggtcttatttat
gtaagaaccaggaaagaagcggaatatctgagtaattggttaaagattagtggtatagag
caggtggattattatcatgcaggattacctgtgaaagaaaagcagatacgccagaattac
tggcttagtaaaaataattatacccttgtttccactaatgcatttggaatgggtattgat
aaagatgatgtaggatttgtaatacacctttccccatctccgtctattgaaaattattat
caggaaataggccgtgccggaagaaacggacaaaacgcggaaaccattctactatggaat
cagagtgaacttactcagattgatgatctgataaaaagtcaactcgccagtaaaacagat
tatcagaaagtctgttcttatgtatattctttttgtcaggttgcagaacatgagcttccg
gaaggtttctttgaaattcaaaccaataagattcagaatcttactaaaatttcccgtccc
aaaatagtatccattctcaggtttcttcataatcaggaaatcatttacctgaaagaatct
aaaggtatgtcttctcttgagttaaaatttgatatctcagaagttgagagtctgggaaag
aaagatagcttttttgttgaaaagttatcccgtgcactagacggagttgctacacatagg
acttattttcgggagaaaaagcttactgataaaatgaatgtcgatgagcagacaataagg
gtgcgcctaagagaattgcatgaaaaggggttggtagattattttgatggcaattcagcc
ggaatcagatttctgatgccacgaaatgacaaagaactgcaaaacagatactggaatcta
ttcgccagcatacaaaaaaataaaatgcagaaatgggaggaaatgaaatattttatcaga
gatacttcttattgcaaaatgagacttattctctcttattttggagaaaaagaaacacaa
aactgtgggaaatgcagctattgcctgacaagtaaaacgggaaccagcgacagagaatat
aagaagatcatttttgaagctcttatgcggtcgccgatgacattggatgaactggctgtt
catctgaaattttatcccaaagatgaactcttggagcatctgaaaattttattggacaga
ggacaagtcagaatgttgaattataaaacttatacactataa
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