Elizabethkingia anophelis NUHP1: BD94_1434
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Entry
BD94_1434 CDS
T03235
Name
(GenBank) Cold-shock DEAD-box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eao
Elizabethkingia anophelis NUHP1
Pathway
eao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BD94_1434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eao03019
]
BD94_1434
03009 Ribosome biogenesis [BR:
eao03009
]
BD94_1434
Enzymes [BR:
eao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BD94_1434
Messenger RNA biogenesis [BR:
eao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BD94_1434
Ribosome biogenesis [BR:
eao03009
]
Prokaryotic type
rRNA helicases
BD94_1434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AIL45209
UniProt:
A0A077EGC1
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All DBs
Position
complement(1518921..1520603)
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AA seq
560 aa
AA seq
DB search
MNLFTETNLSPEILKAIGELGYESPTEIQKQTIPFISSDIRDLIALAQTGTGKTAAFSLP
ILDMVDDTSRKIQFLVLCPTRELCLQITKDIKNYSKYLPNIKTVAVYGGSSINDQIRSLR
EKPQIIVGTPGRVIDLINRKSLDFSNIHWLVLDEADEMLSMGFKDDLETIISETPETKQT
FLFSATMSKEVERISKNYLTKPHRISVGSINEVKKNIKHEYYVVGYRQKKEALKRLIDNN
PNQYSIIFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVDSLTHVIHFSLPDDPEVFVHRSGRTGRAGKDGISIALIKPEESRKLKQIKSQ
SKIEINEKVIPTGKEIIKAQVEGVFEKLFSEHENYFEFDASLIPDLSNFTKEELVGQLLQ
FQLRDMALYYENRNDIAEQKFNGRDDSERGSRRERSRDRDRDRGDRNSRDRGDRKSRKKS
ENMVRFFFNLGKRDELKKVDVLDIINQSTKKSGKKADIGDIEILEKFTFFEVEKSFKNEV
MGNINNKKFKGREMRLEVAN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttaccgaaaccaatttaagtcctgaaattctgaaggctattggtgaacta
ggctacgagagccctactgaaatccagaaacaaacaataccctttatatcatcggacatc
agagaccttatcgctctggcgcagacgggtaccggaaaaactgcagctttttcccttcca
attttggatatggtagatgacacaagccgcaaaatccaatttttggtattgtgtccaacg
cgcgaattatgtcttcagattacaaaagacataaaaaactactctaaataccttcctaac
attaaaactgttgccgtatatggtggtagcagcattaatgaccaaatcagatctcttcgt
gagaaaccacaaattattgtgggtacaccgggacgtgttatcgatttgatcaatcgtaaa
tctttggatttttccaatattcactggttggtattagacgaagcagatgaaatgctttca
atgggcttcaaagatgacttggaaacaatcatcagtgaaactccggaaaccaaacagact
ttccttttctcagcgacaatgagcaaggaagtagaacgtatttctaagaattacttgact
aaaccgcacagaatttctgtaggttctattaacgaggttaagaagaacattaaacatgaa
tattatgtagtaggataccgtcagaaaaaagaagctttaaaaaggcttattgacaataat
ccgaatcaatattctattattttctgccgtacgcgtatggaaactcaagaagttgccgat
ttccttatgcagaatggttatgcagctgatgcacttcacggtgacctttctcaggcacag
cgtgatactgtaatgaagaagttccgtttaaagaatatcgacatcctggttgctaccgac
gttgctgcaagaggactagatgtagattctttaactcacgttatccatttctctttacca
gacgatcctgaagtatttgtacacagaagcggtagaactggtagagcaggaaaagatggt
atatcaattgctttaatcaaacctgaagaaagtcgcaaactaaagcagattaagagtcaa
agtaagattgagattaacgaaaaagtaattcctaccggaaaagaaatcatcaaggctcag
gtagaaggtgtttttgaaaaattattctctgaacacgaaaattattttgaatttgatgct
tctttaattcctgatctttctaacttcactaaagaagaacttgttggtcagctattacag
ttccagcttcgtgacatggcattgtattacgaaaatcgtaatgatattgctgagcagaag
tttaacggccgagatgattctgagagaggaagcagacgtgagcgtagccgcgacagagac
agggacagaggagacagaaacagcagagaccgtggagatcgtaaatcgagaaagaaaagt
gaaaacatggtacgtttcttctttaacctaggaaagagagatgaactgaaaaaagtagac
gtattggatatcatcaaccagtctactaaaaaatcaggtaaaaaagctgatatcggagat
attgaaatcttagaaaaattcacattcttcgaagtagaaaaaagcttcaaaaatgaagta
atgggtaacattaacaacaaaaaattcaaaggcagagagatgcgtttggaggttgctaac
taa
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