Elizabethkingia anophelis NUHP1: BD94_2888
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Entry
BD94_2888 CDS
T03235
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eao
Elizabethkingia anophelis NUHP1
Pathway
eao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BD94_2888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eao03019
]
BD94_2888
Enzymes [BR:
eao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BD94_2888
Messenger RNA biogenesis [BR:
eao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BD94_2888
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
SNF2-rel_dom
UvrD-helicase
ERCC3_RAD25_C
UTP25_NTPase-like
Flavi_DEAD
DUF5612
Utp25_C
Cas3-like_C_2
SERF-like_N
Motif
Other DBs
NCBI-ProteinID:
AIL46663
UniProt:
A0A077EJH9
LinkDB
All DBs
Position
complement(3074161..3075288)
Genome browser
AA seq
375 aa
AA seq
DB search
MISFKNLNLINPIIRAVTEAGYSKPTDIQNMAIPHILEGKDIIGCAQTGTGKTAAFAMPV
LQLLKKKNPEHKSVRTLILTPTRELAIQIEENFKVYSKYLPLSLLCVYGGVGKGSQIAAL
RKRVDILIATPGRLLDLCSDGHVNLSKIEILVLDEADRMLDMGFVNDVKKILRLAPSKKQ
TLFFSATMPVSIRKFANTIVKNPVEVSVTPVSSTAKTIEQSVYFVDKNRKTDLLINLIED
SGISRLLVFTRTKHGADRLVKQLGHTGIFAAAIHGNKSQQARQKALEDFKKSKVRVLIAT
DIAARGIDIDELSFVINYELPNVPETYVHRIGRTGRAGMEGKAVSFCDEDERSDLKNIQK
LIGFTMSVGNQVGLH
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgatcagttttaaaaatttaaacttaatcaatcctataatacgcgcagttacagaagca
ggatattccaaacccaccgatatccagaatatggctataccgcatattcttgaggggaaa
gatattattggctgtgcacagaccggaaccgggaaaacggcagcatttgcaatgcctgtt
ctgcagttacttaaaaagaaaaacccagaacacaaatcagtccgaacacttattctaacc
cccacacgggagctggcaatacagattgaggaaaattttaaggtttatagtaaatatctg
ccattatcactgctttgtgtttatggtggtgtcggtaaggggagtcagattgcggcatta
agaaaaagagtagatatactgattgccacaccaggaaggctcttagatttgtgcagcgat
ggacatgtgaatctttccaaaattgaaattctggttctggatgaagcagacagaatgctt
gatatgggttttgtgaatgatgtgaaaaagattctcaggttagcgccctcaaagaagcag
actctgtttttctctgcaaccatgcctgtttctatacgaaaatttgcaaatacaattgtg
aaaaaccctgtagaagtatcggtaacacctgtttcatcaacagcaaaaactatagagcag
tctgtatattttgtggataaaaacagaaaaactgatttgcttatcaatctcatagaagac
tctggtattagccgtctattggtttttacacgaaccaaacatggagcagaccgattggta
aaacaactgggacatacaggaatatttgctgcggcaattcacggaaacaaatctcaacaa
gcaagacaaaaagcacttgaagactttaaaaaaagtaaagtgcgtgttttaattgctact
gatatcgcagctcgcggaatcgacatcgatgaactttctttcgttatcaattatgaactc
ccgaatgtcccggaaacatatgttcaccgaattggcagaacaggtagagctggaatggaa
ggaaaagcagtttcattttgcgatgaggatgaacgttcggatttaaagaatattcaaaag
cttataggctttacaatgtctgtaggaaatcaggttggcttacactaa
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