Elizabethkingia anophelis NUHP1: BD94_3903
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Entry
BD94_3903 CDS
T03235
Name
(GenBank) RNA-2',3'-PO4:RNA-5'-OH ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
eao
Elizabethkingia anophelis NUHP1
Brite
KEGG Orthology (KO) [BR:
eao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eao03016
]
BD94_3903
Enzymes [BR:
eao01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BD94_3903
Transfer RNA biogenesis [BR:
eao03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BD94_3903
Prokaryotic type
tRNA splicing ligases
BD94_3903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AIL47678
UniProt:
A0A077EMI5
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All DBs
Position
complement(4188551..4189942)
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AA seq
463 aa
AA seq
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MGNLKLKGKDILKIGYPNNQSVNVALEVMKRNFATKNIHYVKSLLKEILLHPENYQKDLS
FGQIAEALLLSKKTEKRMLNNQRAAFQVFGHNISEEAKNQLYTALKLPISLQGALMPDAH
SGYGLPIGGVLAVENAVIPYGVGMDIGCRMSLSILDTPVSYLDGAKDKYEKALAEHTKFG
MYETHKSHIEHEIFERDTFGMIPVLRRLKAKAIKQMGTSGGGNHFVEFGEVEITEEDSQI
GLPKGKYLGILSHSGSRGLGAEIAQYYSRVAVEQCPLPKEARQFAWLDLSTHMGLEYWTA
MTLAGDYASACHDDIHRRLVKAVGGRVNAKIENHHNFAWKEIHNGKEVIVHRKGATPANE
NELGMIPGSMTAKGFIVRGKGNPDSLHSASHGAGRAHSRGACRSLFTQSDIRKELQLKNV
TLMGGNTEEAPMAYKDIHEVMNAQSELVDILGTFQPRIVRMDK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatttaaaacttaaaggaaaagatatattaaagattggctatcctaataatcag
agtgttaatgttgctctggaagtcatgaaaagaaattttgcaactaaaaatattcattat
gtaaaatctcttttaaaagaaattctattacatccggaaaactatcaaaaagacttaagt
ttcggacaaatagcggaagctttattattatctaaaaagactgaaaaacgaatgctgaat
aatcagagggctgcatttcaggtttttggacacaatatttcagaggaggcaaagaatcag
ctttatactgctctaaaattgccaatatcgcttcagggagcattaatgcctgatgcacat
agcggttatggactgcctattggtggtgttttggctgtagaaaatgctgtaattccatac
ggagtaggaatggatattggttgcagaatgagtcttagtattctggatactccggtttca
tatctggacggagcgaaagataaatatgaaaaagcactggcagaacataccaaattcggg
atgtatgaaacccataagtctcatattgagcatgagatttttgaaagagatactttcgga
atgattccggtgctgcgaagactgaaagcaaaagctattaaacagatgggaacatccgga
ggcggaaatcatttcgtagaatttggtgaagtggagattacagaagaagatagccaaatc
ggccttccaaaagggaaatatctggggattttatctcatagtggctcccgtggtctggga
gcagagattgctcagtattattccagagttgctgtagagcaatgtccgttgccaaaagaa
gcacggcagtttgcttggttggatctcagtactcatatgggcttagaatactggaccgca
atgaccctggccggagattatgcttcagcctgtcacgatgatattcaccgcagattggtt
aaagccgtaggtgggagagtgaatgctaaaatagaaaatcatcacaactttgcctggaaa
gaaattcataatggaaaagaagtgattgttcaccgtaagggagcaaccccggctaatgaa
aatgaactgggaatgattccgggatctatgacggcaaaaggatttattgttcgcggaaaa
ggtaacccggattcattacattcagcttcccatggtgccgggagagcccattccagagga
gcatgcagaagtctttttacacaaagtgatatcaggaaagaactgcaattaaagaatgta
acactaatgggcgggaatactgaagaagctccaatggcgtataaagacattcatgaagta
atgaatgcacaaagcgaattagtagacattctgggaacatttcaaccgagaattgtaaga
atggataagtag
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