Exiguobacterium alkaliphilum: KB235_02460
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Entry
KB235_02460 CDS
T07307
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eap
Exiguobacterium alkaliphilum
Pathway
eap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KB235_02460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eap03021
]
KB235_02460
03400 DNA repair and recombination proteins [BR:
eap03400
]
KB235_02460
Enzymes [BR:
eap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KB235_02460
Transcription machinery [BR:
eap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KB235_02460
DNA repair and recombination proteins [BR:
eap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KB235_02460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
SpoIVA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QUE86799
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All DBs
Position
463388..464332
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISEDATFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTAVQIDG
VLHEFSTIDGVVEDVTQIVLNLKKLALKVYSDEEKTLEINVSSAGAVTAADITHDSDVEI
LNPELHIATLADNATLRMRLTARRGRGYVQAEDNKRDDMPIGVIPIDSIYTPIQRVNYEV
DKTRVGQDASFDKLLLDVWTDGSIRPEEAVSLGAKILTEHLNIFVGLTDEALNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKSEEEMMKVRNLGRKSLEEVQ
LKLDELGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagattgaaaaaccaaagatcgaaacggtcgaaatcagcgaggatgctacgttt
ggtaaattcgtagtcgaaccgcttgaacgtggatatggcacgactcttggtaactcacta
cgtcgaattttattgtcatcgcttcctggtgcagcggtaacggcagttcaaatcgatggc
gtgcttcacgagttctctacgattgacggtgtcgtcgaagacgtcacacaaatcgtatta
aacctgaagaagttagcgctcaaagtgtactcggacgaagagaagacgcttgagattaac
gtttcaagtgccggtgctgtcactgcggcagacattacccatgatagcgacgttgaaatc
ttgaatcctgagctccacatcgcgactctcgctgacaacgcgacgcttcgcatgcgtttg
actgctcgccgtggtcgtggttacgtccaggcagaagacaacaaacgtgatgatatgccg
attggtgtcattccaatcgattcgatctacacaccgattcaacgtgtaaactacgaagta
gataaaacacgtgtcggtcaagacgctagcttcgataagcttctattagacgtgtggaca
gatggttcaatccgtccggaagaagcggtatcgctcggggcgaaaattttgacagaacac
ttgaacatctttgttggcttgacggacgaagctctcaatgcagaaatcatggtcgagaaa
gaagaagaccaaaaagaaaaagtactcgaaatgacgattgaagaactcgatctttcagtt
cgttcgtacaactgcttgaagcgcgccggcatcaacactgttcaagaactcgcaaacaaa
tcagaggaagagatgatgaaagtccgtaacctcggacgtaaatcactcgaagaagttcaa
ctcaagttggacgagctcggtttgggcttgcgtaaagaagactaa
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