Exiguobacterium alkaliphilum: KB235_07065
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Entry
KB235_07065 CDS
T07307
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
eap
Exiguobacterium alkaliphilum
Pathway
eap03030
DNA replication
eap03430
Mismatch repair
eap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KB235_07065
03430 Mismatch repair
KB235_07065
03440 Homologous recombination
KB235_07065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eap03032
]
KB235_07065
03400 DNA repair and recombination proteins [BR:
eap03400
]
KB235_07065
Enzymes [BR:
eap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KB235_07065
DNA replication proteins [BR:
eap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KB235_07065
DNA repair and recombination proteins [BR:
eap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KB235_07065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF7282
Motif
Other DBs
NCBI-ProteinID:
QUE87635
LinkDB
All DBs
Position
1367203..1370373
Genome browser
AA seq
1056 aa
AA seq
DB search
MLHLNVQSAYSLMQSTVRLEAYVAQMAERGSRAVALADDAYYGVPQFFRLCARYNVKPVI
GLRTVLRVGGLDVAVLAYAVEASHIEQLYRYVGGGAITEATELAIVVLPDNWKTSDPMHR
RRLFHQLLNHVKEDRLWLGLPAPQTTEHVLVLKQLRAMREELGVRLIPAPETRYMRQDDF
EAYRALVAIGEGDVISEEDIHHRGRHVRLPSEMNDWFDADELAELERFEAGVEPIQLPEA
AAAIPELSEAYPRLKRLVAERLKQKGLLREPYLERARYELEVIERTGFASYFLIVEDIVR
FAKGEAIEVGPGRGSAAGSLVSFALDITEVDPVQFDLLFERFLNPERVSMPDIDLDFEDE
RREEVVRYVLEKYGAHHAAQIGTLATFGAKAALRDVARALGMTLEEGQAASKQVRDDGLQ
GVRSNPTKMKWFAGSKKRSQLLKIASELEGLPRQASIHAAGLVLSREALENVTPLQPTDG
EQVTQYNMKDLEALGLLKIDLLGLRNLTRLRQMETLIRESDAMFSLKTIPLNDAKTLRLL
ARGDTDGIFQFESDGMKQALRQVKPSAFEDIVVTMSLYRPGPMQFIETYAKRKHGMPYQP
VHPVVGELMTTTHGVLVYQEQVMRLLRELAGYSYAEADLVRRAIAKKDVATIEVEKARFL
ERSAASYGEDSMRQVFSWIEKFAGYGFNRSHAVAYSLISYRLAYVKAHFQRVFYVTTYDK
TSQLVRMLRKDKIPIYPPDVLHGQAGPFLEGPGVRLGLKAILGLTKRDVERLIAHHETFK
DVGQLRELMEWGAKDELKLRRLLGAGALDRLYHGERRQAFLAVTRLREQADTHLLPDELS
ALGLKRTEPVEPNWSEEEREALGTWIVHSPLMTVAPLNVTTVTLDEVSVGERGFVVVYVD
AIRTFKTKKHEDMGVMMVDDGVTQDEVVIFPRVFQAFGRSLYSGNVLLLEVHSNERDGRR
QWIVERVRPLHGQALFVRLRRETFAELEELLHASPGDVPVVCRFSDSKEVKQLASAYSVN
PTESLMQALKKRFGETEVVLKRVDSKMAGTKTSTKS
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatttgaatgtccaatcggcgtatagtctgatgcagagcacggttcggttggaa
gcctatgtggcacagatggccgaacgtggtagccgtgccgtggcgctcgccgacgacgca
tattacggcgtccctcaattttttcggctgtgtgcgcgttataacgtcaaaccggtcatc
ggtttgcgtacggtgctacgggtcggcgggctggacgtggcggtgctcgcgtacgctgtc
gaggcgagccacatcgaacagttgtaccggtacgttgggggaggggcaatcaccgaagcg
acggaactcgccatcgtcgtcttacctgataattggaagacgagcgacccgatgcatcgt
cgtcgcctcttccatcaattgctcaatcacgtaaaagaggaccgactatggctcggtctg
cctgcaccgcagacgacagagcacgtcctcgtgttgaagcagctgcgggcaatgcgtgag
gaactcggtgtccggctcatccccgctccggagacgcggtatatgcgccaggacgacttt
gaggcgtatcgcgctttggtagcgatcggggaaggggacgtcatctcggaagaggacatc
catcaccgagggcgccatgtgcgtctgcctagcgagatgaacgattggttcgatgcagac
gagctcgccgaattggagcgtttcgaggcaggcgtcgagccgattcagttgccggaagcg
gctgctgccatccctgaattgtcggaagcctatccacgattgaagcggctcgtcgccgaa
cggctaaagcagaaggggttgctccgtgaaccgtatctcgagcgggcgcgctatgaactc
gaggtcatcgaacggaccggcttcgcctcgtacttcctcatcgtcgaggacatcgttcgt
ttcgccaagggtgaagcgattgaagtcgggccggggcgcggatctgcggccggttcgctc
gttagtttcgccctcgacatcaccgaggtcgacccggttcagtttgacttgctgttcgag
cgtttcttgaacccggaacgtgtatcgatgcctgatatcgatttggacttcgaagacgag
cgccgtgaggaagtcgtccgctacgtgctcgagaagtacggggcacatcatgccgcccag
attgggacgcttgccacgttcggggcgaaagcggcactccgcgacgtcgcccgtgccctc
ggcatgacgctcgaagaagggcaggcggccagcaaacaagtgcgcgatgacggtcttcaa
ggcgtgcggtctaatccgacgaagatgaaatggttcgccggcagtaagaagcggtcccag
ttattgaagatcgcctcggagctcgagggattgccccgccaagcctccatccatgccgcc
ggactcgtcctcagccgggaggcgttagagaacgtcacgccgctccaaccgacggatggc
gaacaagtgacgcaatataatatgaaggatctcgaggcgctcggtcttttgaaaattgat
ttactcggcttgcggaacttgacccggctccggcagatggagacgctcatccgtgagtcc
gacgcgatgttctcgttgaagacgatcccgctcaacgatgcgaagacgcttcgtctgttg
gcccgtggtgacacggatggcattttccaattcgagtcggatgggatgaaacaggcgctc
cgtcaagtgaagccttccgcattcgaagatatcgtcgtcacgatgtcgctctatcgtccg
ggaccgatgcagtttatcgagacgtacgcgaagcgcaagcacggcatgccctatcagccg
gtccacccggtcgtcggtgaactgatgacgacgacgcacggcgtcctcgtctatcaggag
caagtgatgcgtctattgcgtgaactggccggttactcgtacgccgaggcggatttggta
cgacgggccatcgccaaaaaagatgtcgcgacgatcgaagtcgagaaggcgcgttttctc
gagcggtctgccgcttcttacggagaggactcgatgcgtcaagtgttctcgtggatcgag
aagtttgccggctacggattcaaccgttcgcacgcggtcgcatacagcctgatcagctac
cggctcgcctatgtgaaagcccattttcaacgggtgttttatgtcacgacgtatgacaag
acgagtcaactcgtacggatgttgcgaaaagataaaatcccaatctatccgcctgacgtg
ttacacggacaagccggcccgttccttgaaggtccgggcgtgcgactcgggctcaaggcg
atcctaggcttgacgaagcgggacgtcgagcgtttaatcgcgcatcatgaaacgtttaag
gatgtaggacagttgcgagagttgatggagtggggcgcaaaagacgagttgaagctgcgg
cgattgctcggtgccggtgcgctcgatcgcctctatcacggtgagcgtagacaagcgttc
ctcgccgtgacgcgtctacgcgaacaagcggatacccatctcttgccggatgaactgtcc
gcgctcggtttgaaacggacagagccggtcgaaccgaactggtcggaagaagagcgggag
gcgctcgggacgtggatcgtccattcaccattaatgacagtcgcaccgctcaatgtgacg
accgtgacgctcgatgaagtatcagtgggggaaaggggatttgtcgtcgtatacgtcgat
gcgattcgcacgttcaaaacgaagaagcatgaggacatgggtgtgatgatggtcgacgac
ggcgtcacccaagacgaagtcgtcatcttcccgcgcgtgttccaagcgttcggccgatcg
ctctatagcggcaacgtcctattgctcgaagtccattcgaatgagcgtgacggccgccgc
caatggatcgtcgaacgcgtgcggccattgcacgggcaggcgttgttcgtccgtcttcgg
cgcgagacgttcgcggagctcgaagagttgctacatgcgtcaccgggcgatgtgccggtc
gtctgtcgcttttcggactcgaaagaagtgaagcagctcgcttccgcgtattcggtcaat
ccgacggaatcgttgatgcaggcgttgaagaaacggttcggtgagacggaagtcgtcttg
aaacgagtggactcgaaaatggctggtacgaaaactagtaccaagtcataa
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