Exiguobacterium alkaliphilum: KB235_07125
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Entry
KB235_07125 CDS
T07307
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
eap
Exiguobacterium alkaliphilum
Pathway
eap03030
DNA replication
eap03410
Base excision repair
eap03420
Nucleotide excision repair
eap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KB235_07125 (polA)
03410 Base excision repair
KB235_07125 (polA)
03420 Nucleotide excision repair
KB235_07125 (polA)
03440 Homologous recombination
KB235_07125 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eap03032
]
KB235_07125 (polA)
03400 DNA repair and recombination proteins [BR:
eap03400
]
KB235_07125 (polA)
Enzymes [BR:
eap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KB235_07125 (polA)
DNA replication proteins [BR:
eap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KB235_07125 (polA)
DNA repair and recombination proteins [BR:
eap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KB235_07125 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KB235_07125 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QUE87646
LinkDB
All DBs
Position
1382771..1385368
Genome browser
AA seq
865 aa
AA seq
DB search
MNKLLLLDGNSLTYRAFFALPPMTDASGRNTNAVYGFTMMLLKLMEDERPTHFAVAFDAS
KKTFRHDTYADYKGGREKTPGELREQFPIVREICEAFGIQVLELDNYEADDIIGTLSKRD
EFDNVTIVTGDKDLLQLIDDRVTVYLTKRGITDVETMDETAFKERYDGLNPRQMIDLKGL
MGDKSDNIPGIPGVGEKTALKLLNAYGSVEGLYAHTAELKGKQKEKVEANEHEAKLSKQL
ATIHTDVPIEVDVDQLAFHPYDVSKVKSLFMSLQFKSLIGKLQTDEDAVEPAPRQEVTHI
ELDAQDLSRAVLFLEQLREDYFEEPMIGVAIASSAGVTVGDASLLKTDIVKEWLADEARR
TICLDAKQTIIQLKRNGLKLVGYEDLLVAGYLLNLSGGTTLDSIAAHFEHTLPEDDAVYG
KGAKRHIPERDVLEQHLAEKAMAILSLFDHVAAALVENEQTSLYEDLERPLVSVLAEMEW
AGIHVDVATLQAMEQDLGGRIEQLESEIHHLAGEAFNINSPKQLGVILFEKLALPPVKKT
KTGYSTAADVLEKLAPLHPIIEHIMHYRELGKLQSTYVEGLQKVVKEDGKIHTRYTQTLT
QTGRLSSVNPNLQNIPIRLEEGRRIRKAFTASEPGWVLYAVDYSQIELRIMSHMSQDEKM
LDAFLHDEDIHTSTAANVFKVAKEDVTSLMRRQAKAVNFGIIYGISDYGLSQNLGISRKE
AQTFIDTYFEQFPGVKRFMDEAIERARKHGYVETMLKRRRNIPDIHSRNFNLRGFAERTA
INTPIQGTAADIIKKAMIDVDQALRTSTLQSKLLLQVHDELIFEGPKEETEALEKLVKQA
MEHTIQLDVPLRADGSFGETWFDTK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattgctgctccttgatgggaattctctgacgtaccgtgcatttttcgcgctg
cctccgatgacggatgcatcgggccggaacacgaatgcggtgtacgggttcacgatgatg
ctattgaaattgatggaagatgagcgaccgacgcatttcgctgtcgcgttcgatgcctcg
aagaagacgttccgccacgatacatatgcggactataaagggggacgcgagaagacgccg
ggtgagctacgtgaacagttcccgatcgtccgcgagatttgtgaggcgtttggcatccaa
gtgctcgagctcgacaactatgaggctgacgatattatcgggacgctctcgaagcgagac
gagttcgacaacgtgacgattgtgacaggggataaagacttgttacaactgattgatgac
cgcgtcaccgtctacttgacgaagcggggcatcaccgatgtcgagacgatggatgaaacg
gcctttaaagagcgctatgacggtctgaacccgcgccagatgatcgatttaaaaggactc
atgggcgacaagtcggataacattcctggtatcccgggtgtcggagagaagacggcgctg
aagctattgaacgcctacggatcggtcgaagggttgtatgcccacacggctgaactaaaa
gggaaacaaaaagagaaggtagaggcgaacgagcatgaagcgaagctgtcgaaacagctc
gccacgatccatacggacgtaccgattgaggtcgacgtcgaccagctggcgttccacccg
tatgacgtctcgaaagtgaaatcacttttcatgagcctgcaattcaaatcgctaatcggc
aagcttcaaacggatgaagatgcagtcgaacctgccccaaggcaggaggtgacgcacatc
gagctcgacgcccaggacttgtcgcgtgccgtgttgttcctcgagcaactgcgtgaagat
tatttcgaagaaccgatgatcggtgtcgccatcgcctcgagtgcgggcgtgacggtcggt
gacgcctcgctccttaagaccgatatcgttaaagaatggctggcggatgaagcgcgcagg
acgatctgtctcgatgcgaaacagacgatcatccagctgaaacgaaacgggctcaagctt
gtcgggtacgaggacttgctcgtggccggttatttgctcaacttgtcaggcgggacgacg
ctcgattcgattgcggcccactttgaacacacgttaccggaagacgatgccgtctacggc
aaaggggcgaagcgccacatcccggaacgtgacgtgctcgagcaacatctcgccgagaaa
gcgatggcgatcttgtcgctcttcgaccatgtcgccgcggcgctcgtcgagaacgaacag
acgtcgctctatgaagacttagaacgtccgctcgtctcggtcctcgccgaaatggaatgg
gccggtattcacgtcgatgtggcgacgttgcaggcgatggagcaagatttaggtggtcgg
atcgaacaacttgagtcagagattcaccatcttgccggtgaagcgttcaatattaactcg
ccgaaacaactcggcgtcatcttatttgagaagttggcgctcccgccggtcaagaagacg
aagaccggctattcgacggcggcggacgtgctcgagaagctggcaccgctccatccgatt
attgaacacatcatgcattaccgagagctcggaaaactccaatcgacctatgtcgaaggg
ttgcaaaaagtcgtgaaggaagacgggaagattcatacccgttacacgcagacgctgacg
caaaccgggcgtctctcttcggtcaacccgaacttacagaacatcccgattcgactcgag
gagggacgccggattcgtaaggcgttcacagcaagcgaaccgggctgggtactgtacgcg
gtcgactattcacaaatcgagttacggatcatgtcgcacatgtcccaagacgagaagatg
ctcgatgcgttcttgcatgacgaagacatccatacctcgacggcagcgaacgttttcaaa
gtcgccaaagaggatgtgacgtcactcatgcgccgccaagcgaaggcggtcaacttcggc
atcatctatggcatcagtgattatggattgtcacaaaaccttgggattagtcgaaaagaa
gcgcaaacgttcatcgacacgtatttcgaacagttcccgggcgtgaaacgattcatggac
gaggcgattgaacgggcacgtaaacacggatacgtcgagacgatgctgaagcgtcgtcgc
aacatcccagacatccattcacgcaatttcaatctgcgtgggttcgcggagcggacagcc
atcaacaccccgattcaagggacggcggctgatatcatcaagaaagcgatgattgacgtc
gatcaggcgcttcgaacctcgacactccagtcgaagttattgttacaagtgcacgatgaa
ctcatctttgaaggaccgaaagaagagaccgaggcgctcgagaagctcgtcaaacaggcg
atggagcacacgattcaactcgatgtaccgcttcgcgccgacggctcgttcggcgagacg
tggtttgatacaaaataa
DBGET
integrated database retrieval system
