Exiguobacterium alkaliphilum: KB235_07130
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Entry
KB235_07130 CDS
T07307
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
eap
Exiguobacterium alkaliphilum
Pathway
eap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KB235_07130 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eap03400
]
KB235_07130 (mutM)
Enzymes [BR:
eap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KB235_07130 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KB235_07130 (mutM)
DNA repair and recombination proteins [BR:
eap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KB235_07130 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_8
Zn_ribbon_6
Zn_ribbon_TFIIB
RNHCP
Motif
Other DBs
NCBI-ProteinID:
QUE87647
LinkDB
All DBs
Position
1385389..1386213
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AA seq
274 aa
AA seq
DB search
MPELPEVETVCRRLRPFVSGKTIEAVDVFDAKIIRGHEPDQFVEHLLGETILDVERRGKF
ILFKLTNGYLVSHLRMEGKFFPHDERVSPVKHSHVVFTFTDGTTLHYNDVRKFGTMELKT
NEELFVTPPLSLLALEPFDPDVTAEALHRRLSRMNVRAIKTALLDQSIFVGLGNIYVDET
LFRAGVHPTRPAASLSYAEVETVRQEAIAVLTEAIERGGSTIRSYTNPDGATGTFQETLY
VYGQTGNPCQKCGRSIEKMKLGGRGTHYCPHCQQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactacctgaagtggagacggtctgtcgtcgattacggccgttcgtctccgga
aaaacgattgaagccgtagacgtgtttgacgcaaaaatcatccgtgggcacgagccggat
cagttcgtcgagcacttgctcggtgagacgattctagacgtcgagcggcgtggaaagttc
atcttattcaaattgacgaacggatatctcgtttcgcacttacggatggaagggaaattc
ttcccgcatgacgaaagagtcagtccggtcaaacattcgcatgtcgtcttcacgttcacg
gacgggacgacgctccattacaatgacgtccgaaagttcgggacgatggagttgaagacg
aatgaggaactattcgtcacacccccgctgtcgcttctcgcgctcgagccgttcgatccg
gatgtcacggccgaagcgttacacagacggctgagccggatgaacgtccgcgccatcaag
acggcgctacttgaccaatccatttttgtcggactcggtaacatctatgtcgatgagacg
ctgtttcgggccggtgtccatccgacccgaccggcagcgagcttgtcatatgctgaagtt
gagacggtccggcaagaggcgattgccgtcttgaccgaggcgattgagcgaggggggagc
acgattcggagctacacgaatccagacggggcgaccggcacgttccaagagacactttac
gtctacggacagaccggcaacccgtgccagaagtgcggccggtcgattgagaagatgaaa
ctaggcggacggggtacgcattactgtccgcactgccaacagtaa
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