Exiguobacterium alkaliphilum: KB235_07525
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Entry
KB235_07525 CDS
T07307
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
eap
Exiguobacterium alkaliphilum
Brite
KEGG Orthology (KO) [BR:
eap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eap03019
]
KB235_07525
03009 Ribosome biogenesis [BR:
eap03009
]
KB235_07525
Enzymes [BR:
eap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KB235_07525
Messenger RNA biogenesis [BR:
eap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KB235_07525
Ribosome biogenesis [BR:
eap03009
]
Prokaryotic type
rRNA helicases
KB235_07525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DsrH
Motif
Other DBs
NCBI-ProteinID:
QUE85062
LinkDB
All DBs
Position
1465817..1467160
Genome browser
AA seq
447 aa
AA seq
DB search
MNSFQQFKLLPFIVDALTEKRITKPTDIQARIIPAAMNGRDIIGKSQTGTGKTLAFLLPI
LEAINPEEQSVQAIVVAPTRELAWQIHEELKSLLVKQPEFIKTSLIVGGTDRERQIDRMK
NPPQLIIGTPGRILDLMKVQALFPHKVTHFVVDEADQMLDMGFLPEVDRIAQALPEKLQT
MVFSATIPEKLEPFLKKYLHDPRYAEASAEHRVVPKIKHHTIPVRHRDRKELTVEVAKAI
NPFVCLVFTNTKQEADELETTFREAGLNVGTLHGDMQARRRKQAIKDINDAKYQYVIATD
LAARGIDIKGVSHVINFGIPKDLDFYTHRVGRTGRAGATGEAYTLYEDHENGPINRLEER
GFTFTHVDVRNGSLQPIKTRKRRTTDRKMKVSQTAHSRMAGEIKKAKKKVKPGYKKKFKY
KLKETASREHMQSQRKERREIRKKNKR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttgaacagcttccaacagttcaaattgttaccgtttatcgtcgatgccttgacagaaaag
cgcatcaccaaaccgaccgacatccaagcccggatcattccggctgctatgaacggtcgc
gacatcatcggaaaatcacagaccggtacagggaagacgctcgcgtttctcttgccgatt
ttagaagccatcaacccggaagagcagtcggtccaagcgatcgtcgtcgcgccgacacgt
gaacttgcatggcaaattcatgaggagttgaaatcgctcctcgtcaaacaaccggaattt
atcaaaacaagtttgattgtcggtgggaccgaccgtgaacgtcaaatcgatcgcatgaaa
aacccaccacaactcatcatcgggacaccaggtcgtatcctcgacttgatgaaagtccag
gcgctcttcccgcacaaagtcacacactttgtcgtcgatgaggccgatcaaatgctcgac
atgggcttcttgcctgaggtcgaccgcatcgcgcaggcgttgccggaaaaacttcagacg
atggtcttctcggccacgattccagagaagctcgagccgttcttgaagaaatatttgcat
gacccgcgttacgcggaagcgagtgcggagcaccgtgtcgtgccgaaaatcaagcaccac
acgattccagtgcgtcaccgtgaccgtaaagaattgacggtcgaagtcgccaaagcgatc
aatccgttcgtctgtctcgtgttcacgaacacgaaacaagaagcggacgagctcgagacg
acgttccgcgaggcgggactcaacgtcgggacgctccacggagacatgcaagcccgtcgc
cggaagcaagcgattaaagatattaacgacgcgaagtatcaatacgtcatcgcgaccgac
ttggctgcgcgtggtatcgatattaaaggtgtgtcgcacgtcatcaacttcgggatcccg
aaagatctcgacttctacacgcaccgtgtcggccggacgggccgtgccggggcgacgggt
gaggcgtacacgctgtacgaagaccacgagaacggtccaatcaaccgtcttgaagagcgt
ggattcacgttcacgcacgtcgacgtgcgcaacgggtcactccaaccaatcaagacgcgc
aaacgtcgtacgaccgaccggaagatgaaagtttcgcagacggcccacagccgcatggcc
ggggaaattaaaaaggcgaagaagaaagtcaaaccgggctacaagaaaaagttcaagtac
aagttgaaagagacggcctcacgcgagcatatgcagagtcaacgcaaagagcgtcgtgaa
atccgtaagaaaaacaaacgttaa
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