Exiguobacterium alkaliphilum: KB235_08545
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Entry
KB235_08545 CDS
T07307
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
eap
Exiguobacterium alkaliphilum
Brite
KEGG Orthology (KO) [BR:
eap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eap03400
]
KB235_08545
DNA repair and recombination proteins [BR:
eap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KB235_08545
Archaeal homologous recombinant proteins
KB235_08545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
AAA_21
nSTAND3
DUF6205
TRCF
RNase_3_N
DUF5043
Motif
Other DBs
NCBI-ProteinID:
QUE85248
LinkDB
All DBs
Position
1657790..1660801
Genome browser
AA seq
1003 aa
AA seq
DB search
MRPVSLTITAFGPYAETETIDFTKLEGRSMFVISGRTGAGKTTIFDAMTFALYGRASGSL
RNASDFRSQYAEPERKTEIDFSFTIRDERYRIVRQPQQPHPKNKTPIPHEAVLYEWNDAW
KPVATKVNDVEQTIESLLQLSYEQFSQILLLPQNQFRQLLDSDSVKKQQILQSIFKTEAY
RAFQEEWVERHGKYRKQVEWAIETTRLKLLELEDEEIETVAMRNVPDIVTWLEDREERLL
QTKDTVQLEKRAAEIRLEEARTHLNEATVLLTLMEERDTYRNALNTFRDAEKDRVRRRAL
IERLEKVVNVQPHYERFETLRRDAERIKKDRIESQKRDETYAAQLETLHEQSDKMTELRQ
EAERANNRLTDIAELLPYVEEWQRATEKRTALKRQVEQLGVFTDEARLVELRNLEQKLAK
QLEDKPATEQLVEAERRYSQLEYHSHLVEKCERVASELAACERNGKDVQRQHTAQTTLVE
RFVEAEHALMADTLRDRLKAGDPCPVCGSRSHEPVERSGGGANVTEHQLAIETLRRLDTA
LHEARADYRALKLQLDELVNERDTASEALQFHGPASEALKHQASLVQTLRGDVEERKRLE
ATYRTTTQAVRKLETAKREQAEKRQSLFEALQSIQETLQTMRQVDGMTRTTLTTERDQLT
LRLQAVTREVAEYERRLEEVNRLKWGEAERFRLLTEQLEFEERRLNEARAQLDEALQKIE
LTEEAFLQDRTLVDTLPTLKERLAKELEEAGRIEHALQAVEVKIGARPRPEVEALKERVR
VAQEENESLSERLVTADVHLKRHRQTVREWNALREQTDADVRRLETIKLIADTGRGVNPQ
KLTFETYVQTAFFDQILHAANIHLDQMTSGQFQLERKIETAKGNAKSGLELLVFDAYTGQ
SRRVQNLSGGEGFKASLSLALGLAEVVQQLSGGVSLETMLIDEGFGTLDAESLDQAIELL
MSLQSSGRLVGVISHVQELKDRVDARIEVKKTRSGSTIQLVVE
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgagacctgtcagcctgaccatcaccgcattcggcccttacgccgagacggagacgatt
gatttcacgaaacttgaagggcgttcgatgttcgtcatcagcggacgcacaggtgccggc
aagacgaccatctttgacgcgatgacgttcgccctatacggccgggcgagcgggtcgctt
cgaaacgcgagcgactttagaagtcagtatgcggaaccggagcggaagaccgagatcgac
ttctcgttcacgattcgagacgagcggtaccgcatcgtccgtcagccgcagcaaccgcat
ccgaagaacaagacgccgattccgcacgaggcggtgctctatgaatggaacgacgcgtgg
aaacctgtcgcgacgaaagtgaacgacgtcgaacagacgattgagtcgctcctgcagctc
agttatgaacagttcagccaaatcttactgcttccgcaaaatcagttccggcaactgctc
gactcggattccgtcaagaaacaacagattttacagtcgatcttcaagacggaagcgtat
cgcgcgttccaagaggaatgggtcgaacgacatgggaagtatcgaaaacaggtcgagtgg
gcgattgagacgacgcggttaaaactgttagaacttgaagacgaagagatcgaaacagtt
gcgatgcggaacgtaccggatattgtcacgtggcttgaggatagggaagaacgtctgtta
caaacgaaagacacggtgcagctagagaagcgggcggctgagatccgactcgaggaagca
cggacgcatttgaatgaggcaacggtactactcacgttaatggaagagcgggatacgtac
cgtaacgcgctcaacacgttccgtgacgcagaaaaggatcgcgtgagacgacgtgccttg
attgagcggctcgagaaagtcgtgaacgtccaaccgcactatgaacggttcgagacgctt
cggcgcgatgccgagcgcatcaaaaaagaccgcatcgaatcacaaaagcgtgacgagacg
tatgcggcacagcttgagacgttacatgaacaatccgacaagatgacggagctccgccaa
gaagccgaacgggcgaacaaccgattgactgacatcgctgaattgctaccatatgtcgag
gaatggcaacgcgcgacagaaaagcggacagcgttgaagcgacaggtcgagcaactcggt
gtgttcacggacgaggctcgcttagttgagctacgtaacctggaacagaagctcgcgaaa
cagcttgaagacaagcctgcgactgaacaactcgtcgaagcggagcggcgctacagtcag
ctcgagtatcacagccacctcgttgaaaaatgcgagcgtgtcgccagcgagctcgccgct
tgtgagcggaacgggaaagacgtgcagcgtcaacatacagcccaaaccacgcttgtcgag
cgtttcgtcgaagccgagcatgcgctcatggcggacacgctccgggaccggctcaaggcg
ggcgatccgtgcccggtttgcggttcacgtagccatgaacctgtcgaacgttctggtgga
ggggcgaacgtgaccgagcatcaattagcgatcgaaacgctccggcggctcgacaccgcg
ctccatgaggcacgcgccgactatcgggcgctcaagctccaactcgatgaactcgtcaat
gagcgcgacaccgcttccgaagcgttacaattccacggtccggcgagcgaggcgctcaaa
catcaagcgtctctcgtccaaacactccggggcgatgtcgaagagcgtaagcgcctcgag
gcgacgtatcggacgaccacgcaggcggtcaggaaacttgagaccgccaagcgagagcag
gcggagaagcggcaatccttattcgaagcgttgcaatcgattcaagaaacgttacagacg
atgcgacaagtggacggcatgacacgcaccacgttgacgactgaacgcgaccagctgacg
ttacgactccaagccgttacgcgtgaggtcgcggagtatgagcgtcgacttgaagaggtc
aatcgtctgaagtggggggaagccgaacgattccgattgctcacggaacagctcgaattc
gaggaacgccggttaaacgaagcgcgggcgcaactcgacgaggcacttcagaaaatcgag
ttgacagaagaagcattcttacaggaccggacgctcgtcgacacgttgccgacgttaaaa
gaacgtctcgccaaagagctcgaagaggcggggcgaatcgaacacgccctgcaagcagtg
gaagtgaagatcggggcgcggccacgtcctgaggtcgaagcgcttaaagaacgcgtccga
gtggcacaggaggagaacgagtcgctctccgaacgtctcgtcaccgctgacgtccacttg
aaacgtcaccgccagacggtccgcgagtggaatgcgcttcgtgaacaaacggatgccgac
gtcagacggcttgaaacaatcaagctgatcgccgatacggggcgcggcgtgaacccgcag
aagctgacgttcgagacgtacgtccagacggcgttcttcgaccaaatcttacatgcggcc
aatatccatctcgatcaaatgacgagcggacagttccaacttgaacgaaaaatcgagacg
gcaaaaggaaatgcgaagtccggcctcgaattattagtctttgacgcctatacgggccag
tcgcggcgtgtgcaaaacttatccggcggtgaaggctttaaagcttccttgtcactcgcc
ctcggcctagctgaagtcgtgcagcaattgagcggtggcgtcagcctcgagacgatgctg
atcgatgaaggtttcgggacacttgacgccgaatcgctcgaccaggcgatcgagttgctc
atgtcgctccaatcgagcggtcggctcgtcggggtgatcagccacgttcaagagttgaaa
gaccgcgtcgatgcccggattgaagtgaagaaaacaaggagcgggtcgacgatccagctc
gtcgtggagtga
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integrated database retrieval system
