Exiguobacterium alkaliphilum: KB235_08645
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Entry
KB235_08645 CDS
T07307
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
eap
Exiguobacterium alkaliphilum
Pathway
eap03030
DNA replication
eap03430
Mismatch repair
eap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KB235_08645
03430 Mismatch repair
KB235_08645
03440 Homologous recombination
KB235_08645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eap03032
]
KB235_08645
03400 DNA repair and recombination proteins [BR:
eap03400
]
KB235_08645
Enzymes [BR:
eap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KB235_08645
DNA replication proteins [BR:
eap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KB235_08645
DNA repair and recombination proteins [BR:
eap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KB235_08645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QUE85266
LinkDB
All DBs
Position
complement(1678126..1678692)
Genome browser
AA seq
188 aa
AA seq
DB search
MSHSILAIDVETANRDSRSICSVGWSLLYAGEVVETNQLLVNPEEDFDQGNIRVHGIRPS
DVWDAPTLPEVLELLYPTLQKVDLVMAHNASFDMGALKKAIAKYDLYTFPSIEYGCTVKL
SRKLYPQLPNHKLNTMAEYLNEPFLHHNAAEDARVCALLMRDMMMKTGIADPRELHRYTS
VKIGKLAY
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtcacattctattttagccatcgacgtcgagaccgccaaccgtgacagccgaagcatc
tgttcggtcggctggagcttgctttacgccggcgaggtcgtcgagacgaaccagcttctc
gtcaacccggaagaagacttcgaccaagggaatatccgtgtccatggcattcggccgagc
gatgtctgggatgccccgacactgcccgaggtgctcgaactgctctatccgacgctccaa
aaggtcgatctcgtcatggcccacaacgcctcgttcgatatgggcgctttgaaaaaagcg
atcgccaaatatgacctatatacattcccgagcatcgagtatggctgtacggtcaagttg
tcccgtaagttgtacccccagctcccgaaccataagctgaacacgatggccgagtatttg
aacgagccgttcctgcatcataacgctgccgaggacgcacgggtttgtgcgctcctcatg
cgcgacatgatgatgaagaccggcatcgccgacccgcgcgagcttcatcgctatacgtcc
gttaaaatcggaaagctcgcctactga
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