Exiguobacterium alkaliphilum: KB235_12000
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Entry
KB235_12000 CDS
T07307
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
eap
Exiguobacterium alkaliphilum
Pathway
eap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KB235_12000 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eap03400
]
KB235_12000 (ruvA)
DNA repair and recombination proteins [BR:
eap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KB235_12000 (ruvA)
RecFOR pathway proteins
KB235_12000 (ruvA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
5_3_exonuc
IMS_HHH
WIYLD
UBA_6
Motif
Other DBs
NCBI-ProteinID:
QUE85867
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Position
complement(2326502..2327089)
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AA seq
195 aa
AA seq
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MIEFVKGSVAYVCAEYITLDVSGVGYKVHVPNPFFYREQDEHVIVFTHHYVREDQQTLYG
FRSRRERELFNKLLGVNGIGPKGALAIVASGDIDALIDAIETENEKYLTKFPGVGKKTAK
QMALDLKGKLSELAPDYVPQTGLFAQGASELDEACEALVALGYSEREIARVRKELNSEIL
TTDAYIKRALQLLLK
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaattcgtaaaaggctccgtcgcctatgtgtgtgcggaatatataacgttggat
gtttcgggcgtcggctacaaagtacatgtgcctaacccgtttttttatcgtgaacaagac
gaacatgtaatcgtatttacgcaccactacgtgcgcgaagaccaacagacgctatacggc
ttccggtcacgccgggagcgcgagctgttcaataaattgctcggcgtcaacggcatcgga
ccgaaaggggcgctcgccatcgtcgcatcgggcgacatcgatgcgctcatcgatgcgatt
gagacggagaatgagaagtatttgacgaaattcccgggcgtcggcaagaagacggccaaa
cagatggcgctcgacttgaaagggaagctctccgaactcgcaccggactatgtgccgcag
acaggcttgttcgcccaaggcgcatcggaactcgacgaggcatgcgaagcgctcgtcgcc
ctcggctactcggagcgtgagattgcccgtgtccgtaaagaactgaattcagaaatcctg
acgacagacgcttacataaagcgcgccttgcagttgttgttgaaataa
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