Exiguobacterium alkaliphilum: KB235_14290
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Entry
KB235_14290 CDS
T07307
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eap
Exiguobacterium alkaliphilum
Pathway
eap03420
Nucleotide excision repair
eap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KB235_14290 (pcrA)
03430 Mismatch repair
KB235_14290 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eap03400
]
KB235_14290 (pcrA)
Enzymes [BR:
eap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KB235_14290 (pcrA)
DNA repair and recombination proteins [BR:
eap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KB235_14290 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KB235_14290 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QUE86265
LinkDB
All DBs
Position
complement(2767892..2770108)
Genome browser
AA seq
738 aa
AA seq
DB search
MYNLSEELVKGMNPPQAEAVKYTDGPLLIMAGAGSGKTRVLTHRVAYLMASKQIAPWNIL
AITFTNKAAREMKDRIARLVGGVADDIWISTFHSMCVRILRRDIDRIRYDRNFSILDSSD
QLTAIKQVLKELNLDPKKYEPRTLLGMISNHKNELRTPQEAAALVGNNPYEKVISDVYTA
YEKKLKQNNVLDFDDLIMKAIQLFQEAPDVLAFYQKKFRYIHVDEYQDTNRAQYTLVKLL
AEAHENLCVVGDSDQSIYRWRGADIANILTFEKDYPSAHVILLEQNYRSTKRILEAANGV
IQNNSSRKDKKLWTENAEGEKLLLHVASDDRDEAFFIINQMKELRQEGIDYGEMAVLYRT
NAQSRGLEEMLLKSNIPYKMVGGTKFYERKEIKDILAYLRLIANPDEDISFVRVVNEPKR
GIGAATVDKLGDFAAMQGVSLMEAIRDIELSGIAPRTATKLAEFRKLMVDLRQMADYLSI
SELIEEVLKKSGYEEMLKIEKTLEAESRLENLQEFLSVAQNFEKESDEQTLVAFLTDLTL
VSDLDSLEEVDELHQVTLMTLHSAKGLEFPVVFLIGMEEGLFPHSRALNDPEEMEEERRL
AYVGITRAEKRLYLTRAQSRMLYGRFQNNPESRFLHELPETLLERSGKAKKPMPWNPVES
PGKLPVNGFSSKPKPKLAQSSGAESIGWNVGDKANHKKWGQGTVVQTRGEGDQLELDIAF
PAVGIKRLLAKFAPIEKA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtataacttgagtgaagaattggtcaaaggcatgaaccctccacaagcagaggcagtc
aaatatacggacggcccgctgctcatcatggccggggcggggtctgggaaaacacgcgtc
ttgacgcatcgcgtcgcctatttgatggcgtcgaaacagattgcgccgtggaacattctc
gccatcacgtttacgaacaaagcggcccgtgagatgaaagaccgaatcgcccgtctcgtc
ggcggtgtcgcggacgatatttggatttcgacgttccactcgatgtgcgtccgaatttta
cgccgggacatcgatcgcatccgttatgaccggaacttctcgattcttgactcgtccgat
caattgacggcgatcaagcaagtgctcaaagagttgaaccttgacccaaaaaaatacgag
ccacggacgctcctcggtatgatctcgaaccataagaacgagctccgcacgccacaagag
gcggccgcactcgtcggcaacaacccgtacgaaaaagtcatctcggacgtttatacggcc
tatgagaagaagttgaagcaaaacaacgtgctcgactttgacgacttgattatgaaggcg
atccagttgttccaagaagcgccggacgtgctcgcgttctatcagaagaaatttcgatac
atccatgtcgacgaatatcaagatacgaaccgggcccaatatacgctcgttaaactgctc
gccgaggcgcatgagaacttgtgtgtcgtcggggactcagaccagtcgatttatcgctgg
cgcggcgccgacatcgccaacatcttgacgtttgagaaggactatccgagcgcgcacgtc
atcttgctcgaacagaactatcgctcgacgaaacgcattctagaggcggcgaatggggtc
atccaaaacaactcgagccgtaaagataaaaaattgtggacggaaaacgcggaaggggag
aaactcctccttcatgtcgcttcagacgaccgtgatgaagcgttcttcatcatcaatcag
atgaaagagcttcgccaagaaggaatcgattacggcgagatggccgtcctttaccggacg
aacgcccagtcacgtggtctcgaggagatgcttctcaagtcgaacatcccgtacaagatg
gtcggtgggacgaagttctatgaacgaaaagaaatcaaagacatcttggcgtatttgcgc
ttaatcgccaacccggatgaggacatctcgttcgtccgtgtcgtcaacgaaccgaagcgg
ggcatcggcgccgcgacggtcgacaagctcggcgacttcgccgcgatgcaaggcgtatcc
ctcatggaagcgattcgggacatcgaactgtcgggcatcgccccgcgcacagcgacgaaa
ctcgccgaattccgcaaactcatggtcgaccttcgtcaaatggccgactacttgtcgatc
tccgagttgattgaagaagtgttgaagaagtcaggctacgaagagatgctcaaaatcgag
aagacgctcgaagcggagagccggctcgagaacttgcaggaatttctctccgtcgcccaa
aacttcgaaaaggaaagtgatgaacagacgctcgtcgccttcctcaccgatttgacgctc
gtctccgacctcgattcactcgaagaagtcgacgagttgcatcaagtcaccctcatgacg
ctccactcggcgaaaggactcgagtttccggtcgtcttcttaatcggaatggaagaaggg
ttgttcccgcatagccgtgcgttgaacgatcccgaggagatggaagaagagcgccgtctc
gcctacgtcggcatcacgcgggccgagaagcgtctctatttgacgcgagcccagtcccgc
atgttgtatggccgctttcaaaacaacccggagtcgcgcttcttacatgagttgccggag
acgttattagaacgttcaggtaaagcgaagaagccgatgccatggaatccggtcgagtcg
ccagggaaacttcccgtgaacggcttcagctcaaaaccgaaaccgaagctcgcccagtcg
tctggcgccgagtcaatcggttggaacgtcggagataaagcgaatcataagaagtgggga
caaggcacggtcgttcagacgcgtggcgaaggcgatcagctcgaactcgatatcgccttc
ccggccgtcggcatcaaacgcctactcgccaagtttgccccaatcgaaaaagcgtga
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