Candidatus Electronema aureum: LDFHOB_01960
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Entry
LDFHOB_01960 CDS
T10499
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
eaq Candidatus Electronema aureum
Pathway
eaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LDFHOB_01960 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eaq03400
]
LDFHOB_01960 (recD)
Enzymes [BR:
eaq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LDFHOB_01960 (recD)
DNA repair and recombination proteins [BR:
eaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LDFHOB_01960 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
NAT10_TcmA_helicase
UvrD-helicase
AAA_22
UvrD_C
AAA_16
SLFN-g3_helicase
PhoH
NPHP3_N
nSTAND3
DEAD
AAA
PIF1
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
CAK8712821
LinkDB
All DBs
Position
1:425448..427274
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AA seq
608 aa
AA seq
DB search
MIRSTRSLLERACEQGEIRRLDLHLGLFLEKQAGGAGRTNNELLLAATLASAAVSNGHVC
WPLEQNAALPAALPPALLPEPSRWRRSLLASGVVGQPGDTAPLILDQQNRLYLYRLHACE
ELIARELRNRAAAISETDPQVARLLLERLFPRKGNGPDLQQTAAALALLKPLLVISGGPG
TGKTYTAARILTLLQAMHSGSKPLRIALAAPTGKAAARLDESIRAARQSLPDGLGHNMPE
QAQTLHRLLGARPGTDEFRHNRDNPLVLDLLVIDEASMIDMMLMAALLEALPARARLILL
GDRSQLASVEAGSLFADLCGSGEPAWSEQLCAQLRQLTGDCPQPSAEPSGPLADSCILLR
TGHRFHGDSGIGSLAAAVNSGSVEEVERVLFTGFSDLEIEHCTGRTREDWLREQILRGFR
DMAGAATLKEGFVAMEKFRLLCAVHKGPNGTEGINSLAATVLRRAGLISGRDTEWYQGRP
IIILRNHYDLQLFNGDTGLLWRDERDRQLKAWFRRPDGRLHPVVPSLLPERETAYAVTIH
KAQGSEFEQVLLLLPEEESRVLSRELLYTGITRAKSRLILCADRETLAAAVRSRTQRHSG
LAEKLHSS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctcaacacgctccttgttggaacgtgcctgtgaacaaggcgagatacggcga
cttgatctgcaccttggtctctttttggagaaacaggcgggcggggcaggtcgaacaaac
aacgagctgctgcttgctgctaccttagccagcgcagcagtgagcaatggccatgtctgc
tggcctttagagcagaacgccgccttgcctgctgcactgcctcctgctctgttacccgaa
ccgtcccgttggcgcaggagcttgctggccagcggtgttgttggtcagcctggagatacc
gcgccattgattcttgatcagcagaaccgactttacctgtaccgcctccacgcctgcgag
gagctgattgctcgtgagctgcgcaaccgggcagcagcgattagcgagactgacccgcag
gtagctcggcttctgctggagcgactttttcctcgaaaaggcaatggccctgatttgcag
cagaccgctgctgcgctcgctctgctcaagccgctgctggtaatttctggtgggccaggc
acaggcaaaacctacactgctgcccgtattctcactctgctgcaagcgatgcacagcggg
agcaagccgttacggattgccttggccgctcccaccggcaaggctgcggctcggttagat
gagtccatccgcgctgctcggcaatccctgccagacggcttaggccacaatatgccagag
caggcgcagacgttgcaccggctgcttggcgcacggcctggtaccgatgaatttcgccac
aaccgcgataatccgcttgtccttgatctgttagtgatcgatgaagcctcaatgatcgac
atgatgctgatggccgctctgcttgaagccctgcctgcacgggcaaggctgattctgctc
ggcgaccgcagccagcttgcttcggtagaggcgggcagtcttttcgctgatctctgcggc
agcggcgaaccggcttggtcagagcaactttgcgcccagctgcgccaactcaccggtgat
tgtccgcaaccatcggcagaaccgagcgggccgctggctgattcctgtattctattgcgc
actggccaccgttttcacggcgatagcggtatcggcagcttggcagcagcagtgaacagc
ggttcggttgaggaggttgagcgggtgctgtttacaggtttctctgatttggagattgaa
cattgcacaggacgcacgcgcgaggattggttgcgggagcaaatactgcgtggctttcgg
gatatggctggggctgctacgctaaaggaaggctttgtcgcaatggaaaaattccgtctg
ctttgcgctgttcacaaagggccgaatggcactgagggtattaacagtctggccgctacc
gtgctgcgccgcgcggggctaatcagcggtcgggatacagaatggtatcagggtaggccg
atcatcatcctgcgtaaccactacgatcttcagctgttcaacggtgatactggcctgctc
tggcgcgacgaacgcgaccggcagctgaaagcttggttccggcggccagacggtaggctg
catccggttgttccttcgctgctgccagagcgtgagaccgcttacgccgtcactatccat
aaggcccaaggctcggagtttgagcaagtgctgcttctgctgccggaggaggagagccga
gtcctcagccgagagctgctttacactggcatcacccgcgctaaaagcaggctgatcctc
tgcgctgaccgcgagacgctggctgccgctgtacgctcacgtacccagcgacattctggc
ttggcagaaaagctgcatagcagttga
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