Candidatus Electronema aureum: LDFHOB_02020
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Entry
LDFHOB_02020 CDS
T10499
Name
(GenBank) Exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
eaq Candidatus Electronema aureum
Pathway
eaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LDFHOB_02020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eaq03400
]
LDFHOB_02020
Enzymes [BR:
eaq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LDFHOB_02020
DNA repair and recombination proteins [BR:
eaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LDFHOB_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
Helicase_RecD
TraI_hel_assoc_N
nSTAND3
AAA_22
PIF1
HHH
AAA_28
AAA
AAA_5
NPHP3_N
DEAD
UvrD-helicase
AAA_18
Thymidylate_kin
SRP54
UvrD_C
ABC_tran
CbiA
TrwB_AAD_bind
HHH_3
Mg_chelatase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CAK8712877
LinkDB
All DBs
Position
1:complement(438257..440734)
Genome browser
AA seq
825 aa
AA seq
DB search
MLPPLPFSQLPPETLSGVVERITYHNPENGWAVLRVNPFDARGGTATVVVHQLRVFAGAT
MQFSGEWIVHPRFGRQFKADKATELKPASAGALEKYLGSGLIKGIGPKTAHKIVSHFGKD
TLDVFEERIERLTDVPGIADKKLAMISAAWTEHRAIRDVMLFLQTHGISTLFAVRIYKQY
GDESIAAVSANPYRLAEDLYGIGFFTADKVALSIGFGQDSPLRITAAIRHVLNASREQGH
CWLTQAQIDKQVSELLQLSLADRIALFLHEMEQQDKLCVRLLVTRKGREPERCYYSKSLY
YDEQYVAERLRQMVRPLLHDAERIADWLRRFGGKSGIQLSEEQAAAVQTIACCQFAILTG
GPGCGKTTTTRVLVALLRAMGRSVLLAAPTGRAAQRMSEVIGLEAKTIHRLLEWQGGGFK
RNQENPLRTDVLIVDECSMLDISLTASLLKAVADETEVVFIGDADQLPSVGAGNVLRDLI
GSGHIPVCTLNTVFRQASQSRIITFAHQINHGETPRIGSPFKQPDLWKQSDCLFLDSDEA
TQEQLHFIGKVRQHFKTVEEREQAGAEDPFSFETDALSSSYQRFALPEQFQHVDLHTLTV
AEGPAEELTAVAKKVHPWSSLYYGMTAADTVRRLCTEWIPKYYGAGCEIQVLSPMNRGSL
GTGSLNKMLQEAVNPAQEGKAEIRLGERLFRVGDRVIHLRNNYDLGVFNGDIGRITGVDN
ANMTLRVCFSPDQREVEYQREQLTELDLAYAITIHKSQGSEFEAVILPVLTQHFRMLFRN
LIYTGLTRARKLAVFVGTRKALTMAVGNKDTGLRQTALRELVGGE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcctcctctgcctttctcgcagctcccgccggaaacccttagtggcgtggtcgag
cgcatcacctatcacaacccggaaaacggctgggccgtattgcgggtcaatccttttgat
gcacgcggcggcacggccaccgtggtcgtgcatcagctccgggtctttgcgggcgcaact
atgcagttcagcggcgagtggattgttcatccccgctttggtcgccagtttaaggcagac
aaggccacggagctgaagccagcctcagcaggcgcactggagaaataccttggctctggt
ctgatcaaaggcatcggccctaagaccgcgcacaaaatcgtcagtcattttggcaaagat
acgttggatgtctttgaggagcgaatcgagcgactgaccgacgtgccgggcattgctgac
aagaagctcgccatgatcagcgcggcctggacagagcaccgtgccatccgcgatgtgatg
ctcttccttcagacgcacggcatttccactctcttcgcggtgcgcatctacaagcagtac
ggcgacgagtccatcgccgctgtctcggccaatccctaccgcttggctgaagacctctac
ggcatcggctttttcacggctgataaggtggctctgtccattggctttggtcaggactca
ccgctgcgaatcactgccgccatccgccacgtgctgaatgccagccgcgagcagggccac
tgctggctgacgcaggctcagatcgacaagcaagtttccgaactgctgcaactgagcctt
gccgaccgcatcgccctcttccttcacgagatggagcagcaggacaagctctgtgtccgc
ctgcttgtcacccgcaaaggccgcgagccggaacgctgctactactcgaaaagcctgtat
tacgatgaacagtatgtggccgagcggctgcgtcagatggtgcggcctctgctgcatgat
gcggagcggattgctgactggctgcgccgcttcggtggcaaaagcggcatccagctcagt
gaggagcaggcggcggcggtgcagactatcgcctgctgccagttcgctattcttactggc
gggccaggctgcggcaagactaccaccacacgggtattggtcgctctgctgcgggcaatg
ggccgctcggtactgctggctgcgcccacgggccgggccgcccagcgcatgagcgaggtg
atcggcttggaggccaagaccatccaccgcctgctggaatggcagggcggcggcttcaag
cgcaaccaagagaacccactgcgcaccgatgtccttattgtcgatgaatgctcgatgctc
gacatcagcctgaccgcttcgctgctcaaagcggtggctgatgagacagaggtggttttc
atcggcgatgcagaccagctaccttctgtgggtgcaggtaatgtcctccgtgatttaatc
ggctccgggcacattccagtctgcaccttgaacaccgtcttccgccaagcgagccagtcg
cgcatcatcacctttgcccatcagatcaaccacggcgaaacgccgagaatcggctcgccc
ttcaagcagccggatttatggaagcagagtgactgcctgttccttgattcagacgaggcc
acgcaggagcagcttcatttcatcggcaaggtcaggcaacattttaagaccgtggaggag
cgcgagcaggccggagcggaagacccgttcagctttgaaaccgacgcactcagcagctcc
taccaacgttttgccctgccggagcagttccagcatgtggacttgcacacgctgacggtc
gccgaagggccagcggaagagctgactgcggtggccaaaaaggtgcatccttggtcgtcg
ctgtattacggcatgaccgctgcggatacagtgcggcggctctgcacggagtggattccc
aaatactacggcgcgggctgcgagattcaagtgctttcgccgatgaaccggggcagcctc
ggcacgggttcattgaacaagatgctgcaagaggcggtgaatccggcgcaggaaggaaag
gcggaaatccggctcggcgagcggcttttccgggtcggcgaccgggtgattcacctgcgc
aacaactacgacctcggcgtgttcaacggcgacatcggcaggatcacaggcgtggacaat
gcgaacatgacgctgcgagtctgcttttctcctgatcaacgcgaggtggaatatcagcgc
gagcagctcacggagctggatttggcgtatgcgatcaccatccacaaatcgcagggttct
gagtttgaggcggtgatcctgccggtgctgacccagcattttcggatgcttttccgcaat
ctgatctacaccggcctgacacgggcgcggaagctagcggtgttcgtcggcacgaggaag
gcgttgacgatggcggtggggaataaggacactgggttgagacagacggcgttaagggag
ttggtgggcggggaatga
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