Candidatus Electronema aureum: LDFHOB_02415
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Entry
LDFHOB_02415 CDS
T10499
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
eaq Candidatus Electronema aureum
Pathway
eaq03020
RNA polymerase
Brite
Enzymes [BR:
eaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LDFHOB_02415 (rpoC)
Transcription machinery [BR:
eaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LDFHOB_02415 (rpoC)
DNA repair and recombination proteins [BR:
eaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LDFHOB_02415 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
CAK8713234
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Position
1:520828..524892
Genome browser
AA seq
1354 aa
AA seq
DB search
MEELFSFFDKPKGPLVFDKVKISLASPTKILEWSHGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECNCGKYKRMKHRGVICEKCGVEVIQSKVRRERLGHIKLAAPVAHIWFLKSL
PSKIGSILDMTLKELERILYFESYVVSSSNVEALPKGMLLNEEQYRESLEQYPGEFDVGI
GAEAIRELLKELDLVELSTQLRKEMKETASLTRRAKLGKRLNVTEAFRDSGNRPEWMILE
VIPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLELDAPDIIIRNEKRMLQ
EAVDVLFDNGRRGRTITGPNKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPH
LRLHQCGLPKKMAQELFKPFIYNRLESMGYVTTIKSARKMVEKGAKEVWDVLDDIVSEYP
VILNRAPTLHRLGMQAFEVVLIEGKAIQLHPLVCAAFNADFDGDQMAVHLPLSVEAQVEA
RVLMMSTNNILSPASGSPVIIPSQDIVLGLYYMTRERYGVKGTGTIFSSPAEARIAYDHD
AVHLQAKVKVRIKGELVDTTLGRILVGELLPEKLPFAVVNKELSKKELSFLVDYTYRHAG
TKDTVILADRIKDLGYEQATRAGISICINDMKIPANKEKFVEESERKAAEVDEQYSEGLI
TDGEKYNKIVDIWSKATDKITQEMMAEMSVDYITDNEGKIKEVKSFNSVYIMADSGARGS
KDQIRQLAGMRGLMAKPSGAIIETPIKANFREGLSVLEYFISTHGARKGLADTALKTANS
GYLTRRLVDVAQDSTIVEKDCGTMRYTLAEPLLDGGEVIVRIGERILGRVASDDVLDPHS
GQVLVGMDEEITEDKVEAIEAAGIDRVKIRSVLTCESRRGVCAMCYGRDLGRGHMVNIGE
AVGIIAAQSIGEPGTQLTMRTFHIGGTASRSVEQAEVRSQRSGVAKYHKLHSVANAAGFN
IVMNRNAEVIIVDDQGVDRERFPVPYGAELKVADGEKVEPGTVIADWDAFSIPIVAEVGG
RIKYGDVIEGDTMQERVDQVTGKVSRVIIHPVVSKHSTPRISIKDERGRTMKLPGLEHDA
RYPLPVGSIIAADEGTDVTAGTVVAKIPRETTKTKDITGGLPRVAELFEVRKLKEQAIVT
EIDGRVTFGKELKGKRRVVISPETGEAREYLVPKSKHVIVHEGDYVKAGDALMDGSVLPN
DILRIKGEEALARFLVDEVQEVYRLQGVKINDKHIETIVRQMLKRIKITDPGDTKFMLDQ
LVEKWVFYDENERMMAQGLQPASAEPQLLGVTKASLSTDSFISAASFQETTKVLTNAAMT
GKVDTLDGLKENVIMGRLISAGTGLSRYRISKTK
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaactgttcagcttttttgataagccaaaagggccgcttgtattcgacaaggtc
aaaatttcccttgcatcgccgacaaaaattctcgaatggtcccacggcgaggtaaaaaag
cctgagaccatcaattaccgcactttcaaaccagaacgcgacggtttattttgcgctaag
atatttggtccggtcaaagactacgagtgcaactgcggcaaatacaagcgcatgaagcac
cggggtgtaatctgcgaaaaatgcggagttgaggtcattcagtccaaggtgcggcgcgag
cgtctcggccatatcaaattggctgcgccagtcgcccatatttggtttctcaagtcgctg
cccagtaagatcggctctattcttgacatgaccctcaaggaattggagcgtattctttat
tttgagtcttacgtagtcagcagctccaatgttgaagccttgccaaagggcatgttgctc
aatgaggagcaatatcgcgaaagtttggagcaatatcccggcgaatttgatgtcggtatc
ggggctgaggccatccgtgagttgctcaaagagttagacttagtggagctgtccactcag
ttgcgcaaggagatgaaggagacagcctccctcactcggcgggccaagctcggtaaacgg
ttgaatgttaccgaagccttccgcgattccggcaaccgacctgagtggatgatactggaa
gtgattccagtgttgccgccagatttacgtccgttagtgccgctggaaggtggtcgtttt
gctacctctgatttgaacgatctctatcgtcgtgtaatcaaccgcaataaccgcctcaag
cgtctgctagaattagacgcaccagacatcatcatccgcaacgaaaaacggatgctgcaa
gaggcagtagatgtgctgttcgacaatggtcgtcgaggccgtaccatcactgggccgaat
aagcgtccgctgaagtcgctttctgacatgctcaagggcaagcaaggtcgcttccgccaa
aatctgctcggcaaacgcgttgactattcaggtcgttcggttatcgtggtcgggccgcat
ctgcgcctgcaccagtgcggtttgccgaaaaaaatggcgcaggagctattcaagcctttt
atttacaatcggctggaatcgatgggttatgtaactaccatcaaaagcgcacgcaaaatg
gtggaaaagggtgcaaaagaagtttgggacgtactagatgatatcgtcagcgaatatcca
gtcattctgaaccgcgcccccaccttgcatcgtttgggtatgcaggcctttgaagttgtc
ttgattgaaggtaaagccattcagttgcatccgttggtttgcgctgctttcaatgcggac
tttgacggcgatcagatggctgtgcatctaccgctctcggttgaggcgcaggttgaggcc
cgcgtcctgatgatgtccaccaacaacatcctctcgcccgccagcggaagtccggtcatt
attcccagccaagacatcgtcctcggtttatactatatgaccagagaacgctatggggtg
aaaggcaccggcactattttcagttcgcctgctgaagcccgcatagcctatgatcacgac
gcagtgcatttgcaagccaaggtcaaagtgcggatcaaaggcgaattagtcgatactacg
ctgggtcgaattttggttggtgaactgttgccggaaaaattgcctttcgcggtggtcaac
aaggagctgtcgaaaaaagaactgagcttcttggtggattacacctatcgtcatgctggc
accaaagatacggttattcttgctgatcgaattaaggatttaggctacgagcaagccacg
cgggctggtatttccatctgcatcaacgacatgaaaattccggctaataaggaaaaattc
gttgaggaatcagaacgaaaagccgctgaggttgacgagcaatactctgaaggtttgatc
acggacggcgagaagtacaacaagatcgttgatatttggtctaaagccacggataaaatc
acccaagagatgatggctgagatgtcggtagattatatcaccgataacgaaggcaagatt
aaggaagtaaaaagtttcaattcggtctatatcatggccgattctggcgcgagaggctcg
aaagaccaaatccgccagcttgctggtatgcgcggcctgatggccaagccttctggtgcg
atcattgaaacgccgattaaggctaacttccgcgaaggactgtcggtactggagtatttc
atctctacccacggtgctcgcaaaggtctggctgacaccgccctgaaaacggctaactct
ggttatctgactcgccgtctggttgatgtggcccaagattcaaccatcgtggaaaaggac
tgcggcaccatgcgttataccttggccgagccgctgttagacggcggtgaggtgatcgtt
cgtatcggtgagcgtattttgggtcgagtagccagcgacgacgtgctggatccgcattcc
ggccaagtgctggtgggcatggatgaggaaatcactgaagacaaagtcgaggcgattgag
gccgcaggcattgatcgggtgaaaattcgctctgttctgacctgtgagtctcggcgcgga
gtctgcgccatgtgctatggccgcgatttgggtcggggtcacatggtcaacatcggtgag
gcggtgggcattattgccgcccaatccatcggcgagccgggtacccagctgaccatgcgt
accttccacatcggcggcactgccagtcgttcggtcgagcaagctgaagtacgcagccag
cgtagcggcgtggccaaataccataaattgcattcagttgccaatgctgctgggttcaat
atcgttatgaaccggaacgccgaagtgatcattgttgatgatcaaggtgtggatcgtgag
cgcttcccggtgccttacggtgctgaactcaaagtggcggacggagaaaaagtcgaaccc
ggtacagttattgcagattgggatgctttctctattccaattgttgccgaagtaggtggt
cggatcaaatacggcgacgtgattgagggcgacaccatgcaggagcgggttgaccaagtg
accggtaaggtctcaagggtcatcattcatccggtggtttccaagcattccactccgcgc
atctcgatcaaggacgagcgcggtcggaccatgaagttacctgggctggagcatgatgcc
cgctatcccctaccggtcggctcgatcattgcggcagatgaggggacagatgtgacagca
ggtactgtggtggccaagattccgcgcgagaccacgaagaccaaggatattactggcggt
ctgcccagagttgccgagctgttcgaggtgcgcaagctgaaagagcaggctattgtcact
gaaattgacggtcgagttacctttggcaaagaactcaagggaaagcggcgcgtggtgatc
agcccagaaaccggcgaggcgagagagtatttagttccaaaatccaagcatgtcattgtc
catgagggcgattacgtcaaggcgggtgacgctttgatggacggttctgttctgcctaac
gacattctgcggattaagggcgaagaggctttggcccgcttcttggttgacgaagtgcag
gaagtttatcggctccaaggcgtgaagatcaacgacaagcatatcgagacgatcgttcgg
cagatgctcaaacggatcaaaatcactgatccgggtgacaccaaatttatgctggatcag
ttggtagaaaaatgggttttctatgacgagaatgagcgaatgatggcccaaggtctccag
ccagcctcagcggagccacagttgctgggcgtgacaaaagcctcactttctaccgactcc
ttcatttcagcggcttccttccaagaaaccaccaaggtgctgacgaacgcggcaatgacc
ggcaaagtggatacgttggatggattgaaggagaacgtgatcatggggcggctgatttca
gcgggcacaggactctcaaggtaccgtatcagcaagacaaagtga
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