Candidatus Electronema aureum: LDFHOB_02580
Help
Entry
LDFHOB_02580 CDS
T10499
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eaq Candidatus Electronema aureum
Pathway
eaq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eaq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LDFHOB_02580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaq03021
]
LDFHOB_02580
03400 DNA repair and recombination proteins [BR:
eaq03400
]
LDFHOB_02580
Enzymes [BR:
eaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LDFHOB_02580
Transcription machinery [BR:
eaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LDFHOB_02580
DNA repair and recombination proteins [BR:
eaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LDFHOB_02580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
CAK8713395
LinkDB
All DBs
Position
1:542993..544048
Genome browser
AA seq
351 aa
AA seq
DB search
MVQEIRDDNPFYKNWHNLVMPERLEVAKNSHTSRYGKFVCQPLERGFAATIGNSLRRILL
SSIRGAAITSVKVEGAQHEFTTIDGVHEDVADIILNLKLVRPRLHSSETRIAFIKKVGPG
RVTAADIDGGPGVEIMNPEQHICTVTGENASFQAELEIQWGKGYVTAEWNKKEDQPIGMI
PLDAAFSPVRRIQYVVSQARVGQHTDYDRLTIEIETDGSVLPENALAYAAKILKEQMTVF
INFNEQEASAPERLKGDGDGADGFPAFLDKNVEDLELSVRSANCLKNADIQYIGQLVQKT
DAEMLKTKNFGRKSLNEIKALLSQHNLTLNMNLEGWIPPDERERERSYEEE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggaaatccgggacgacaatcccttttacaagaattggcataatttggttatg
ccggagcggctggaagtcgccaaaaatagccatacgtccagatacggcaaatttgtttgc
cagcctttggagcgtggttttgcggcgaccatcggcaattccctgcgcaggatactgctg
tcatccattcggggcgcggctatcacttcggtaaaagttgaaggagcgcagcacgagttc
acgactattgatggcgtgcatgaggatgttgctgacattatcctgaatctgaagttagtc
agacctaggctgcattcctccgagactcggattgccttcatcaaaaaggttgggccaggt
agggtaacagcagcggacatcgatggcggtccgggtgtggaaattatgaacccggagcag
catatctgcaccgtgaccggagaaaatgcctcgtttcaggccgaattagagattcagtgg
ggcaagggctatgtaacggcggagtggaataaaaaagaggatcagccgattggcatgatt
cctttggatgctgctttttcgccggtgcgcagaattcagtacgtggtgagtcaagcccgt
gtcggtcagcacaccgattatgaccgtttgaccatagaaattgagacagatggttctgtt
ctgccggagaacgcgcttgcttatgcagccaaaatcctcaaggagcagatgacagtcttc
atcaacttcaacgagcaagaggcttctgctcctgaacgactgaagggtgatggcgatggc
gcggacggcttcccggctttcttggacaaaaatgtcgaggacttggaactgtcagtgcgt
tcggctaactgcctgaagaatgccgatattcagtacatcggccagttagtgcagaaaact
gatgctgagatgctgaaaaccaagaactttggccgcaagtcgctcaatgaaatcaaggca
ttgctttctcagcataatttaacccttaatatgaatcttgagggttggattccgcctgac
gagcgtgaacgggaaagaagctacgaggaagaatag
DBGET
integrated database retrieval system
