Candidatus Electronema aureum: LDFHOB_05775
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Entry
LDFHOB_05775 CDS
T10499
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
eaq Candidatus Electronema aureum
Pathway
eaq03030
DNA replication
eaq03430
Mismatch repair
eaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDFHOB_05775 (dnaE)
03430 Mismatch repair
LDFHOB_05775 (dnaE)
03440 Homologous recombination
LDFHOB_05775 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eaq03032
]
LDFHOB_05775 (dnaE)
03400 DNA repair and recombination proteins [BR:
eaq03400
]
LDFHOB_05775 (dnaE)
Enzymes [BR:
eaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDFHOB_05775 (dnaE)
DNA replication proteins [BR:
eaq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LDFHOB_05775 (dnaE)
DNA repair and recombination proteins [BR:
eaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LDFHOB_05775 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Intein_splicing
tRNA_anti-codon
LAGLIDADG_3
CcmE
tRNA_anti_2
DUF655
Motif
Other DBs
NCBI-ProteinID:
CAK8716443
LinkDB
All DBs
Position
1:complement(1160346..1165199)
Genome browser
AA seq
1617 aa
AA seq
DB search
MSQSFTHLHVHTQYSMLDGAIRIGDLIEKTKEYGMNAVAVTDHGAMYGALEFYTKAKKAG
IRPIIGCELYIAETDHLIHDKSAGHNFHLVLLAMNEDGYRNLMKLASVAQTAGFYYKPRI
DRKLLASHHEGLIALSACLHGEVPWLISHSGMDAARQKALELQQLFGNRLYFEVQENGIP
EQTKVNVGLQELGNDLGIKLVATNDCHYLNKDEAYAHEVLLCIQTSKVISDPGRFKFSTD
ELYFKPPEVMARQFSWCPEALSNTMEVAERCDLKLKFGENHFPIFPVPAGESLESLFEHA
CRDGLEQRLALLRELQEVSQELEQQYRERLEMEIKVIQKMGFAGYFLIVADFINWAKSKG
IPVGPGRGSGAGSLAAYCMAITDIDPIPYGLLFERFLNVERVSMPDFDVDFCKDRRDEVI
DYVRQRYGGDAHVAQIVAYGSMKARAVLRDVGRVLEIPLPQVDRIAKLVPEELKITLKKA
IDQEPRLRDAMREESIQKLLKVAQTLEGLARHKSTHAAGVVISPKPMVEYLPVCIGPDKE
ILTQYDMKYTEMTGLIKFDFLGLKTLTVIDRALKLIKQDIGLEVQLNKLPTDDQKTYDLL
CAGSSLGVFQLESDGMRELLINMAPEQFTDLIALVALYRPGPLDSGMVKQFVETKHGRRP
AEYPLPQIKEVLRETYGVIVYQEQVMKISNILASYSLGDADILRRAMGKKIPEEMEKERG
KFMAGAKVNGIPEERAAYVFDLMAKFAGYGFNKCVVGATRLLDAETGELLTVEELHQQPR
RFMVHALGEDGKLRPRQVLDVFENGIKPVFELRTVQGHRITATANHPFRTLHGWTLLGDL
KPGDRIAAPRRLIVQGGRCWPRHELITLAGLLAEGNVCHPSSLYFFGNDAVLVQDFAEAA
AQFPESKARVYQRSDGRFEVCVNTGRDMRFGKKERSAEEEAAPPVRSGAWHWAEQLGILG
KKAVEKAVPPEVFLLADADIELFLGRLWAGDGFIANHDQFTPFYATSSFQLAYDVQTLLL
RLGIPSGVHEKQFRYRGEMRQGYTVHLVGEGTAETFIRRVAPHALGRERQVEQLRHHLEG
KQPGLTSKDTVPVEVRTWVDEERRGAGLTWSELEQRSSLCMKEFMGKGSAGKRGFRRSTL
ARLAEFFTSSRLAQLAESDIFWDSVVSIEPRGEQQTYDLTVEEDHNFVADGLIVHNSHSA
AYALVAYHTAYLKAHYPAQFLAALLSCDVDNTDKVVRYINECRQMSIEVLPPDINESYHD
FTVIKDRIRFGLAAVKGVGGAALDSVIEERRKAPYTSLADFCGRVDSSRVNRKVLENLIK
AGAFDSMRAKRAQLMEVLDKTIEQAKTVQRDRMSGQMSLFSMGGGAAKSGASVAAEIKLP
DVEEWAPLVKLGYEKETVGFFLTGHPLDGVIDHIRLVADSDLAAMESWKDGQIVRVGGLI
QRFKEHRSKKGDRMAFTVLEDMTASVEVVVFPETFAKCSHLLGSEQPLIVQGSVQVSERG
ANIIADEVLPLHEAMEKFATQAVIKIQAARTSRSQLTALKELFYQFHGTLPVKITLHFDG
RGEADIEPGPDLKVRPCPEFCQRVQECVGPQSLKMPMQKAEPRRKKSEGGGDRSYQR
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtccttcacccacctgcacgtccacacgcagtattccatgctcgacggtgcc
atccgcatcggcgacctgatcgagaagacgaaagaatatggcatgaacgccgtggctgtc
accgaccacggggccatgtacggcgcactggagttttacaccaaggcgaagaaagctggc
atcaggccgatcatcggctgcgagctgtacattgctgagaccgaccacctcattcacgac
aagagcgcgggccacaacttccacctcgtcctgctggcgatgaacgaggacggctaccgc
aacctgatgaagctggcttcggtggcgcagacagcgggcttctactacaagccgcgcatt
gaccgcaagctgctcgccagccaccacgaaggcttgatcgccctttccgcctgcctgcat
ggcgaggtgccttggctgatcagtcacagcggcatggacgcggcccggcagaaggctctg
gaattgcagcagctcttcggcaaccggctttacttcgaggtgcaggagaacggcatcccg
gagcagacgaaggtcaatgtcggcttgcaggaattaggcaatgatctcggcatcaagctg
gttgccaccaacgactgccactacctcaacaaggacgaggcgtatgcccacgaggtgctg
ctctgcattcagaccagcaaggtgatcagcgatccgggccgcttcaagttctccactgat
gagctgtatttcaagccaccggaggtgatggcccgccagttcagctggtgcccagaagca
ctgagcaacacgatggaggtggcggaacgctgcgacctcaagctgaagttcggcgagaac
cacttccccatcttcccggtgcctgcgggcgagtcgctggaaagcctctttgagcacgcc
tgccgcgacgggctagagcagcggctggctctgctgcgcgaattgcaggaggtcagccag
gagctggagcagcagtaccgcgagcggctggagatggagatcaaggtcatccagaagatg
ggcttcgcgggctatttccttattgttgctgactttatcaattgggccaagagcaagggc
atccctgtaggtccaggtcgtggttcaggagcggggagtctcgccgcctactgcatggct
atcaccgacattgaccccatcccctacggcctgctcttcgagcgcttcctcaacgtcgag
cgggtgtccatgcccgactttgacgtggacttctgcaaagaccggcgggacgaggtgatt
gattatgtccgccagcgttacggcggcgatgcgcacgtggcccagattgtcgcctatggt
tcgatgaaggcgcgggccgtgctgcgcgacgtgggccgggtgctggagattcctctgccg
caagtagatagaatcgccaagctggtgccggaagagctgaagatcaccctgaagaaggcg
attgaccaagagccacgcctgcgcgatgcgatgcgggaggagagcattcagaagctgctc
aaggtggcgcagacgctggaaggattggcccggcacaagtcaacgcacgccgccggggtg
gtgatctcgccgaagccgatggtggagtatctgcccgtctgcattggcccggacaaggag
atcctcactcagtatgacatgaaatacaccgagatgaccggactgatcaagttcgacttc
ctcggattgaagaccctgaccgtcattgaccgcgccctcaagctgatcaagcaggacatc
ggccttgaggtgcagctcaacaagctgccgactgacgaccagaagacctacgacctgctc
tgcgcgggcagcagcttgggcgtgttccagctcgaaagcgatgggatgcgcgagctgctg
atcaatatggccccagaacagttcaccgacctgatcgcccttgtcgccctctatcggccc
ggcccgctcgactccggcatggtgaagcagtttgttgagactaagcatggccgccgtcct
gctgagtaccctttgccgcagatcaaggaggtgctgcgggagacctacggggtcatcgtc
tatcaagagcaggtgatgaaaatctccaacatcctcgcctcctacagcctcggcgacgcg
gacatcctccgccgggctatgggtaagaagatacctgaggagatggagaaggagcgcggc
aagttcatggccggagccaaggtcaacggcatcccggaggaacgggccgcgtatgttttt
gacctgatggcgaagttcgcggggtatggcttcaacaagtgcgtcgtgggagccacccgg
ctgcttgacgcagagacaggtgagctgctcacagtcgaagagctgcatcagcagccgcgc
cgcttcatggtgcacgcccttggcgaagatggcaagctgcgtccgaggcaggtgcttgat
gtttttgaaaacgggatcaagccggtttttgagctgcggacagtgcaggggcatcgcatt
acggccaccgcgaaccatcctttccgcacccttcacggctggacgctgctcggtgatctt
aaacccggcgaccggattgccgcgccccgccggttgattgtgcagggaggcagatgctgg
ccgcgccacgagctgattacgcttgccggtctgctggcggaaggcaatgtctgccacccc
tcctcgctctacttctttggcaacgatgccgtgctggtgcaggacttcgccgaggccgca
gcgcaattcccagagagcaaagcgcgggtgtatcagcgcagtgacggacgctttgaggtc
tgcgtgaacacgggccgcgatatgcgcttcggcaagaaagagcggagcgcagaggaggaa
gctgccccgcctgtccgctctggcgcatggcactgggctgaacagcttggcatcttgggc
aagaaggccgttgagaaggctgtcccgccagaggtcttccttctggctgatgcggacatc
gaactgttcctcggcaggctctgggcaggcgacggcttcattgccaatcacgaccaattc
acgccgttctatgccacctcgtccttccagctcgcctacgacgtgcaaacgctgcttctg
cggctgggcatcccaagtggtgtccacgagaagcagtttcgttaccgaggggaaatgcgt
cagggctacacagtgcatctggtcggggaaggcactgccgagaccttcatcaggcgtgtt
gcccctcatgcgcttgggcgggagcggcaggtcgagcagctccgccatcaccttgaaggg
aagcagcctggcctgacctcgaaagacaccgttcctgtagaggtgcgcacgtgggtggac
gaagagcgcaggggcgcaggtctgacgtggagcgagctggagcaacgctccagcctgtgc
atgaaggaattcatgggcaaaggctctgccgggaaacgcggtttccgccgctcaacactt
gcccggctggcggagttcttcacctccagccgacttgcccagcttgctgagtccgacatc
ttctgggacagcgtggtgtccattgagccgcgtggcgagcagcagacttacgatctcacg
gtggaggaagaccacaacttcgtggcggacggcctcatcgttcataactcccattcagcc
gcctacgccctcgttgcctatcacaccgcctacctcaaggcccactatcctgcccagttc
cttgccgcgctgctctcctgcgacgtggacaacaccgacaaggtggtgaggtacatcaac
gaatgcaggcagatgagcattgaggtgctgcccccggacatcaacgagtcctaccatgac
ttcacggttatcaaagaccgcatccgctttggcttggcagcggtgaagggcgtgggcggc
gcggccttggactcggtcatcgaggagcggcgcaaggcgccgtacacatccttggccgac
ttctgcgggcgggtggattcgagccgggtcaaccgcaaggtgctggagaacctgatcaag
gccggggcgtttgactccatgcgggccaagcgggcgcagctgatggaggtcttggacaag
accattgagcaggccaagactgtgcagcgcgaccggatgagcggccagatgagcctcttc
agcatgggcggcggcgcggccaagagcggggcaagcgtggcagcggagatcaagctgccc
gacgtggaggagtgggcaccgctggttaagctcggctatgagaaggagacggtcggcttc
ttcctcaccggccatccgctcgacggcgtgatagaccacatccgcctggtggccgactcc
gaccttgcggcgatggagagctggaaggacggccagatcgtgcgggtcggcggcctgatt
caacgcttcaaggagcaccgctcaaagaagggcgaccgcatggccttcaccgtgctggag
gacatgacggccagcgtcgaagtggtcgtcttccccgagacctttgccaagtgttcacac
ctgcttggcagcgagcagccgctgattgtgcaaggctcggtgcaggtcagcgaacgcggt
gccaacatcatcgccgacgaggtgctgcccctgcacgaggcgatggagaagtttgccacg
caagcggtgatcaaaatccaagcagcccgcaccagccgctcccagctcaccgcgctgaag
gaactgttctaccagttccacggtacgctgccggtcaaaatcaccctgcactttgacgga
cgcggcgaggcggacatcgagccggggcctgacttgaaggtcaggccttgcccggagttc
tgccagcgggtgcaggagtgtgttggcccgcagagtctgaagatgccgatgcagaaggcc
gagccacggcggaaaaagagcgaagggggcggtgaccgttcttatcagcgatga
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