Candidatus Electronema aureum: LDFHOB_09280
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Entry
LDFHOB_09280 CDS
T10499
Name
(GenBank) WD40 repeat
Organism
eaq Candidatus Electronema aureum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
nSTAND1
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Ge1_WD40
NBCH_WD40
Tricorn_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_NWD2_C
PROPPIN
PD40
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Cytochrom_D1
WD_LRWD1
Tricorn_N
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Me-amine-dh_H
Trypsin_2
Beta-prop_NUP159_NUP214
Beta-prop_pof12
NACHT
AAA_16
Trypsin
AAA_29
SMC_N
DUF3379
Motif
Other DBs
NCBI-ProteinID:
CAK8719856
LinkDB
All DBs
Position
1:1880785..1885101
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AA seq
1438 aa
AA seq
DB search
MSSPSLEFALVRILINDQSPRKPVGAGFLVTPRHLLTCAHVINDALGRKQNAAEQPDLPV
FLDFPLLPGQPLLQAKILHWFPLRDDSTVGELEDIAVLELPADAVLPAGVQPAPFEVLDN
KASFLDDAVRMCGFPAGVDDGTYANGRLQGRNAKGWVEIHHQDSNIVEQGFSGTAVWAVK
ENAVCGMTVSMLSKRDATIAYMIPALTLLKALPAIDAFNRSFNPYRGLEAFREKDARFYF
GRQEAVELIRQAALRQSFTAVIGASGSGKSSAVFAGLVPLLKASKTDRWLCAACRPKSQP
FDELAACLIPFLYDDALEQIKKAKDCAADLAAGKLSLPDLLRPVLGRNSGAKLLLIVDQF
EELFTLNPDKALVRRYIEELLAARQAEGCAALITMRADFLGTAIAYDLFAEALNNCPPIM
LPPMGGQGLREAVEQPAALLHVSFEPGLADLIAEDVGSEPGSLPLLEFCLTQLWEKQERR
QISHAAYKASGGVQGALAGHADKVLKEFDEQQVRQIFLKLVRPGQGTEDTRQVAALEQFS
PEQCGLIQKLADKDRRLLVTSGDADGKEKNVEVVHEALIRCWRTLRQWVDKEREFLVWRE
KLKMLLKQWQESGHDEGALLRGLPLAEAAQWRESHAGYLAGAKDELEFIAASEQLRESEW
LAREAAKEEKERQRKRSMIALAAGLMIAIALSVFAVAQWQKTAQQTIAANYNLAKAFEKE
GLRSLERADKEGTDAYKKALLFGYAAFEQKIDPRKSALDQSSVDLLFAPEIFNAALAELT
IFGGHENFINSAVFSPDDTRIASASYDKTARIWDIETGRELKVLKGHNETINSVAFSPDG
RRIASASHDKTVRIWDVATGKELTVLKGHEEAVNSVAFSPDGRQIASASEDKTVRIWDAI
TGKELTVFKGHEKLLFSVAFSPDGKRIASASEDKTVRIWDAITGKELAVLKGHEEAVNSV
AFSPDGRQIASASWDKTVRIWDAITGKESAVLKGHEDLVISAAFNPDGRRIASASHDKTV
RIWDAETGKEIAVFHHDEAVRSAAFSRDGKRIASASYDKTVRIWDAETGSDRYLLKGHEY
AVYSASFSSNGRWIVSASYDKTVRIWNAETGRNLAVLRGHESVVRSATFSPDGKWIASAS
EDKTVRIWGLPTGKVLAVLKGHEDHVTSVAFSPDSKRIASASDDKTVRIWNAATGKVLTV
LKGHEKTIYSATFSPDGRRIASASEDKTVRIWDAATGKVMAVFKGHEGRVNSAAFSPDGR
RIASASEDKTVRIWDAATGKVMAVFKGHESYVNSAAFSPDGKRIASASYDKTVRIWDIKS
GKLLAVLNGHEKPVSSTSFNPDGTRVASASRDNTVRIWDLKLCTLFLQNFDKPTPFYFTF
MEAVKFLWQVKLDGLEFVSTDRRTAADMEKFGSLLAPPPPGQSKFDQVLEWAEKQQPK
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccccgtccttggagtttgcccttgtccgcatcctgattaacgatcaaagcccg
cgcaagccagttggcgcgggctttcttgtcacaccgcgccatctgctgacctgcgcccat
gtcatcaatgacgcacttgggaggaagcagaatgcggctgaacagcctgatctccccgtt
tttctcgacttccccttgctgcccggtcagccgctgcttcaggcgaagattctgcattgg
tttcctctccgggatgattccaccgtcggcgagctggaggacatcgcggtgctggagctt
cccgctgatgcagtcctgcccgccggagttcagcctgcgccctttgaggtgctggacaac
aaagcctcgtttcttgacgatgcggtcagaatgtgcggctttcccgcaggcgttgatgac
ggcacctacgccaacggcaggctgcaaggccggaacgccaagggctgggtggaaattcac
catcaggacagcaacattgttgagcagggcttcagcggcacggcagtatgggcggtgaag
gagaacgcggtttgcggcatgaccgtgagcatgttgagcaaacgggatgccacaattgct
tatatgattcccgccctcactttgctcaaggcgttgcccgccattgatgcgttcaaccgc
tccttcaatccctacaggggcttggaagcgttccgggaaaaggatgctcgattttatttc
ggcaggcaggaggcggttgagctgatccggcaggctgcgctcaggcagtcgtttaccgct
gtcatcggcgcgagcggcagcggcaagtcttctgccgtgttcgccgggctggtgccgctg
ttgaaagcaagcaaaaccgacagatggctgtgcgccgcctgccgtccgaagagtcagccc
tttgatgagctggccgcctgtctgattccttttctgtatgatgacgcgctggagcagatc
aaaaaggccaaggactgcgccgccgatcttgcggcagggaaactgagcctgcctgatctg
ctccggcctgtgctcggcagaaacagcggggcaaagctcctgctgattgttgaccaattt
gaggagctgttcaccttgaacccggacaaagcccttgtccggcggtacatcgaggagttg
cttgcagcccggcaggcggaaggctgcgccgcgctgatcaccatgcgggcggatttcctc
ggcaccgcgattgcctatgacctttttgccgaagccctgaataactgtccgccgatcatg
ctgccgccgatgggcgggcagggcttgcgggaggcggtggagcagcctgccgccctgctg
catgtctcttttgagccgggtctggctgatctgattgctgaggatgtgggcagcgagccg
ggcagtctgccgctgctggagttctgcctcacccagctttgggagaagcaggagcgcagg
cagatcagccacgccgcctacaaggccagcggcggggtgcagggtgcgctggccggtcat
gcggacaaggtgctcaaggagtttgacgagcagcaggtcaggcagattttcctcaagttg
gtgcggcctggacagggcacggaagacacccggcaggtggcggctcttgagcagttttcg
ccggagcagtgcggtctgatacaaaaacttgctgataaagaccggcggcttctagtgaca
tcgggtgatgcggacggcaaggaaaagaatgtcgaggtggtgcatgaggctctgatccgc
tgctggcggacgctgcggcagtgggtggacaaagagcgggagttcctcgtctggcgggag
aagctgaagatgctgctgaagcagtggcaggagagcggccatgatgagggtgcgttgctg
cggggtctgccgctggctgaggcggcgcagtggcgggaaagccatgcgggatatttggca
ggcgcgaaggacgagctggagtttattgctgccagtgagcagcttcgggagagcgagtgg
ctggcacgggaggcggcaaaggaggaaaaggaaaggcagcggaaaaggagcatgattgcc
ttggcggctggtttgatgatagcaattgctctgtcagtgtttgcggttgcacagtggcag
aagacggcgcagcagaccattgcagcgaactacaaccttgccaaggcatttgagaaagaa
ggattgcgctccttagaaagagctgataaggaaggcactgatgcatataaaaaggcattg
ctatttggctatgctgcttttgagcagaagattgatccaaggaaatctgccttggatcaa
tcttctgtagatcttctttttgcgcctgaaatattcaatgctgcactggcggagctgact
atttttggagggcatgagaattttatcaacagtgctgtcttcagccctgacgacacacgg
atcgcttctgcttcttacgacaagacggctcggatatgggacatcgagacaggcagagag
ctgaaagtcctcaaagggcataatgagactataaacagcgtggctttcagtcctgacggc
aggcggattgcttccgcttctcacgacaagacagtgcggatatgggatgttgcaaccgga
aaagaattgaccgtcctcaaagggcatgaggaggctgtaaacagcgttgccttcagtcct
gacggcaggcagattgcttctgcatctgaagacaagactgtgcggatatgggacgctata
accggaaaagaactgactgtttttaaggggcatgaaaaattgctcttcagcgtagctttc
agtcctgacggcaagcggattgcctccgcatctgaagacaaaacagtgcggatatgggat
gctataaccggcaaagaattggccgtcctcaaaggacatgaggaggctgtaaacagcgtt
gcctttagtcctgacggcaggcagattgcttctgcctcttgggataagacagtacggata
tgggatgctataaccggcaaagaatcggccgtcctcaaagggcatgaggatttagtcatc
agcgcggcttttaatcctgacggcaggcgaatcgcttccgcttctcacgataagacagtg
cggatatgggatgcagaaactggcaaagagatagctgtgttccatcatgatgaggctgtt
cgcagcgcggccttcagtcgtgatggcaaacggattgcttccgcttcttacgacaaaacg
gtacgtatatgggatgccgagactggcagcgatagatacctccttaaaggacatgaatat
gctgtctacagtgcttcctttagttctaacggcagatggatcgtttcggcatcttacgac
aagacagtgcggatatggaatgcagaaaccggcagaaatttagccgtgttgagaggacat
gaatctgttgtccgtagcgcaaccttcagtcctgatggcaaatggattgcttccgcttcc
gaggataagacagtacggatatgggggctgccaactggtaaagtgcttgccgtccttaaa
gggcatgaggatcatgttacaagcgtggccttcagccctgatagcaaacggatcgcttcg
gcttctgacgacaagactgtgcggatatggaacgctgcaactggcaaagtgctgaccgtc
cttaaagggcatgaaaaaactatctatagcgcaaccttcagtcctgacggcagacggatc
gcttcagcttccgaggataagactgtgcggatatgggacgctgcaactggcaaagttatg
gccgtctttaaagggcatgaaggtcgagtcaacagcgcagccttcagtcctgacggcaga
cggatcgcttcagcttccgaggataagactgtgcggatatgggatgctgcaactggcaaa
gtgatggctgtcttcaaagggcatgaaagttatgtcaatagcgcggccttcagtcctgac
ggtaaacggattgcttcggcttcttacgataaaacggtgcggatatgggatatcaagagc
ggcaaactgttagccgtcctcaatgggcacgaaaagcctgttagcagcacatctttcaat
cctgacggtacaagggtcgcttctgcttctagggacaatacggtgcgaatatgggatttg
aagctctgtacgctttttctgcaaaattttgataagcccacgcctttctactttaccttc
atggaagcggtgaaattcctctggcaggttaaactggacggccttgagtttgtgtcaaca
gaccgccgcaccgcagcggacatggaaaaattcggcagcctgcttgcgcccccgccgccc
ggtcaaagcaaattcgaccaagtgcttgagtgggcggagaagcagcagccaaagtga
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