Klebsiella aerogenes EA1509E: CCG32330
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Entry
CCG32330 CDS
T02447
Name
(GenBank) Protein RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ear
Klebsiella aerogenes EA1509E
Brite
KEGG Orthology (KO) [BR:
ear00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ear03016
]
CCG32330
Enzymes [BR:
ear01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CCG32330
Transfer RNA biogenesis [BR:
ear03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CCG32330
Prokaryotic type
tRNA splicing ligases
CCG32330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
DUF4402
Motif
Other DBs
NCBI-ProteinID:
CCG32330
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All DBs
Position
complement(3650913..3652139)
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AA seq
408 aa
AA seq
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MAHNDYHLLTAENSAPIKMWTRGVPVEPEARVQLLNTAKMPFVFKHLAVMPDVHLGKGST
IGSVIPTKGAIIPAAVGVDIGCGMMAVRTSLIASDLPDNLGGLRSAIEQAVPHGRTNTRS
RRDKGAWETPPQEVDQQWSLLAPRFKRLTDKYPQLLKTNNHQHLGTLGTGNHFIEVCLDE
QQRVWVMLHSGSRGVGNAIGNLFITLAQNDMQQHIANLPDRNLAYFQEGSPHYEDYIEAV
EWAQDFARHNREVMMARVLAALSAIVTKPFMTQQEAVNCHHNYVQKERHFGEEVLVTRKG
AVSAQKGQMGIIPGSMGAKSFIVRGLGNKESFCSCSHGAGRVMSRTASKKRFTVADQIRT
TAHVECRKDSEVIDEIPLAYKDIEAVMAAQSSLVEVVHTLRQVVCVKG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcgcataacgattatcacctgctgacggcggaaaatagcgcgccgatcaaaatgtgg
acccgcggcgtgccggtagagccggaagcacgcgtccagttgctgaatacggcaaaaatg
ccgtttgtctttaaacatctggcggtgatgccggacgtgcatctcgggaaaggctcgacc
attggtagcgtgatcccgacaaaaggggcaatcattccggcggccgtcggcgtggatatt
ggctgcggtatgatggcggtgcgtacttcgctcattgccagcgatctgccggataacctg
ggcggattgcgcagcgcgatcgagcaggcggtaccgcacgggcgaactaatacgcgctcc
cggcgcgataaaggcgcctgggagacgccgccgcaggaagtcgatcagcagtggtcgcta
ctggctccgcgctttaagcgcctgacggacaaatatccgcagttgttgaaaaccaataat
catcagcatctcggaacattgggtaccggcaatcactttattgaagtgtgcctggatgaa
cagcagcgggtatgggtgatgctgcatagcggttcgcgcggcgtcggtaatgctatcggc
aacctgtttattaccctggcgcagaacgatatgcagcagcatatcgctaatctgccggac
agaaatctggcctactttcaggaaggtagcccgcactacgaggattacatcgaggcggtg
gaatgggcgcaggatttcgccaggcataatcgcgaggtaatgatggcgcgggtactggcg
gcgctatcggccattgtgacgaaaccgtttatgacccagcaggaggcggtcaattgccac
cataactatgtgcagaaagagcggcactttggcgaagaggttctggtcacgcgtaaaggc
gcggtatcggcgcagaaggggcaaatgggcatcattcccggctcaatgggggcaaaaagc
ttcattgtgcgcggattgggtaataaagagagtttctgctcatgtagccacggcgcagga
cgcgtgatgagccgaacggcgtcgaaaaagcggttcaccgtcgcggaccagatccgcacg
accgcccatgtcgaatgccgaaaagatagtgaggtgatcgacgaaattccgctggcttat
aaagacattgaggcggtgatggccgcgcaatcgtcgctggtagaggtggtacataccctg
cgtcaggtcgtctgtgttaaaggataa
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