Klebsiella aerogenes EA1509E: CCG32443
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Entry
CCG32443 CDS
T02447
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ear
Klebsiella aerogenes EA1509E
Pathway
ear03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ear00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCG32443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ear03021
]
CCG32443
03019 Messenger RNA biogenesis [BR:
ear03019
]
CCG32443
Transcription machinery [BR:
ear03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CCG32443
Messenger RNA biogenesis [BR:
ear03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CCG32443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CCG32443
LinkDB
All DBs
Position
complement(3785598..3786857)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHSKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaacctggctcgtatgcgtaagcaggatattatttttgccatcctcaag
cagcattcaaagagtggcgaagatatctttggcgatggcgtactggagatactgcaggat
ggatttggattcctccgctcagcagacagctcctacctcgccggtccagacgacatctac
gtatcccccagccaaatccgccgcttcaacctccgcactggtgacaccatttccggtaag
attcgtcctcctaaagagggtgaacgttacttcgcgctgctgaaagttaacgaagttaac
tacgacaagccggaaaacgcgcgtaacaagattctgttcgagaacttaacgccgctgcac
gcgaattcacgcctgcgtatggagcgtggtaatggttctaccgaagacttaaccgctcgc
gtactggatctggcatcgccgattggccgcggccagcgtggtctgatcgtcgcgccgccg
aaagccggtaaaaccatgctgctgcagaacatcgcgcagagcatcgcgtacaaccatcct
gactgcgtgctgatggtgttgcttatcgacgaacgtccggaagaagtgaccgagatgcag
cgtctggttaaaggtgaagttgtcgcttctaccttcgacgaaccggcatctcgtcacgtg
caggttgccgaaatggttatcgagaaagcgaaacgtctggttgagcacaaaaaagacgtt
attatcctgctcgactccatcacccgtctggctcgtgcctacaacaccgtggttccggct
tccggtaaagtgctgaccggtggtgtggacgccaacgccctgcatcgtccgaagcgtttc
ttcggtgcggcgcgtaatgtggaagagggcggcagcctgaccatcatcgctaccgcgctt
atcgataccggctctaaaatggatgaagttatctacgaagagtttaaaggtaccggtaac
atggaactgcacctctcccgtaagattgcggaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgctgaccacccaagaagagctgcagaaaatg
tggatcctgcgcaaaatcatccatccaatgggtgaaatcgacgcaatggagttcctcatt
aacaagctggcgatgaccaaaactaacgacgacttcttcgatatgatgaagcgttcgtag
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