Klebsiella aerogenes EA1509E: CCG33144
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Entry
CCG33144 CDS
T02447
Name
(GenBank) Cold-shock DEAD-box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ear
Klebsiella aerogenes EA1509E
Pathway
ear03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ear00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCG33144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ear03019
]
CCG33144
03009 Ribosome biogenesis [BR:
ear03009
]
CCG33144
Enzymes [BR:
ear01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CCG33144
Messenger RNA biogenesis [BR:
ear03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CCG33144
Ribosome biogenesis [BR:
ear03009
]
Prokaryotic type
rRNA helicases
CCG33144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCG33144
LinkDB
All DBs
Position
4509794..4511728
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AA seq
644 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAF
SLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPTAEGEELD
VETLAAALLKMAQGERSLIVPPDAPMRPRREFRDRDDRFERRGDRNDRGPRGDREDRPKR
ERRDVGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIELPKGMP
GEVLQHFTRTRILNKPMNMQLLGDAQPRTERRGGGERREGGRGFGGERREGGRSFGGERR
EGGRGEGRRFSGERREGGRAPRRDDASAPRRDDSAGRRRFGGDA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcg
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctg
ctggacggccgcgacgttctgggtatggcccagaccggtagtggtaagaccgcagcgttc
tctttaccgctgctgaacaacatcgatcctgagctgagagcaccgcagattctggtgctg
gcgccgacccgcgaactggcggtacaggttgctgaagcaatgacggaattctctaaacat
atgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcagctgcgc
gccctgcgtcaggggccgcagatcgttgtcggtaccccgggtcgtctgctggaccacctg
aagcgcggtacgctggatctctctaaactgagcggtctggtactggacgaagcagatgaa
atgctgcgcatgggctttatcgaagacgtagaaactatcatggcgcagatcccggaaggt
catcagaccgctctgttctccgccacgatgccggaagcgattcgtcgcattacccgccgc
ttcatgaaagagccgcaggaagtgcgcattcagtccagcgtcaccacgcgcccggacatc
agccagagctactggactgcttacggcatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagactttgatgcggcgattatcttcgtgcgtaccaaaaacgcgaccctggaa
gtggcagaagcgctggagcgtagcggctataacagcgccgcgctgaacggcgatatgaac
caggcgctgcgtgagcagactctggagcgcctgaaagacggtcgtctggatatcttgatc
gccaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggttgttaactat
gacatcccgatggattccgaatcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgcgggtcgcgcgctgctgttcgttgagaaccgtgagcgtcgcctgctgcgtaacatc
gaacgtacgatgaagttgacgatccctgaagtagaactgccgaacgcagaactgctgggc
aaacgtcgtctggagaaattcgccgctaaagttcagcagcagctggaaagcagcgatctg
gaccagtaccgtgcgctgctggctaaaatccagccgaccgcggaaggcgaagagctggac
gtggaaacgctggccgctgcgctgctgaaaatggcccagggcgaacgttctctgatcgtt
ccgccggatgcgccgatgcgtccgcgtcgtgaattccgcgatcgtgatgaccgtttcgaa
cgtcgtggcgaccgtaatgaccgcggcccgcgcggcgatcgtgaagatcgtccgaagcgt
gagcgtcgtgacgtgggtgaaatggaactgtaccgcattgaagtgggccgtgatgacggc
gttgaagttcgtcatatcgttggcgcgatcgctaacgaaggcgacatcagcagccgctac
atcggcaacatcaagctgttcggttctcactctaccatcgaactgccgaaaggtatgccg
ggcgaagtgctgcagcactttactcgtacccgcatcctgaacaagccgatgaacatgcag
ctgctgggcgatgcgcagccgcgcaccgaacgtcgtggcggcggcgagcgtcgtgaaggc
ggtcgtggcttcggcggcgagcgtcgtgaaggcggtcgtagcttcggtggcgaacgtcgt
gaaggcggtcgtggtgaaggtcgtcgtttcagcggcgaacgtcgtgaaggcggccgcgcg
ccgcgtcgtgacgatgcttccgcgccgcgccgtgatgattccgcgggtcgtcgtcgtttc
ggtggcgatgcgtaa
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