Enoplosus armatus (old wife): 139288997
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Entry
139288997 CDS
T11455
Symbol
col2a1a
Name
(RefSeq) collagen, type II, alpha 1a isoform X1
KO
K19719
collagen type II alpha
Organism
earm Enoplosus armatus (old wife)
Pathway
earm04510
Focal adhesion
earm04512
ECM-receptor interaction
earm04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
earm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139288997 (col2a1a)
04518 Integrin signaling
139288997 (col2a1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139288997 (col2a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
earm00536
]
139288997 (col2a1a)
Glycosaminoglycan binding proteins [BR:
earm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139288997 (col2a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
139288997
NCBI-ProteinID:
XP_070766586
LinkDB
All DBs
Position
8:18749758..18772443
Genome browser
AA seq
1487 aa
AA seq
DB search
MFSFVDSRTVLLLVASQVVLLSVVRCQEEDDQEAGGCIQDGQQYNDKDVWKPEPCRICVC
DSGAVLCDEIICEEIKECANPIIPSGECCPICPADASAPIETIGAKGQKGEPGDIADVVG
PKGPPGPMGPPGEQGIRGEAGAKGDKGNPGPRGRDGEPGTPGNPGPSGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGAPGEAGEPGPAGSMG
PRGPPGPSGKPGSDGEAGKPGKAGERGPAGPQGARGFPGTPGLPGIKGHRGHPGLDGAKG
ENGAAGAKGESGSAGENGAPGPMGPRGLPGERGRPGAAGAAGARGNDGLPGPAGPPGPVG
PAGAPGFPGSPGSKGEAGPTGARGSEGQQGPRGEAGTPGSPGPAGASGNPGTDGIPGAKG
SAGASGIAGAPGFPGPRGPPGPQGATGPLGPKGQSGDPGLPGFKGEAGPKGELGPAGPQG
APGPAGEEGKRGARGEPGTAGPLGPPGERGAPGNRGFPGQDGLAGAKGAPGDRGVPGAAG
PKGATGDPGRTGESGLPGARGLTGRPGDAGPQGKVGPSGASGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKPGEKGLVGRPGLRGLSGKDGETGASGPSGPAGPAGERGEQGQPG
PNGFQGLPGPAGAPGEAGKPGDQGVSGEGGAAGAVGPRGERGFPGERGGAGAQGLQGPRG
LPGTPGSDGPKGAIGPAGGAGSQGPPGLQGMPGERGTGGIPGPKGDRGDNGQKGPEGAPG
KDGARGLTGPIGPPGPSGPNGAKGETGPSGPTGASGARGAPGDRGEGGPPGPAGFAGPPG
ADGQPGAKGELGESGQKGDSGAPGPQGPSGAPGPVGPTGVSGSKGARGAQGAAGATGFPG
AAGRVGPPGPNGNPGSAGPSGAAGKDGPKGARGDAGLPGRQGDNGLRGPAGTQGEKGEPG
EDGPPGADGPSGPQGLAGSRGIVGLPGQRGERGFPGLPGPSGEPGKQGASGSSGDRGPPG
PVGPPGLTGPSGETGREGTPGSDGPPGRDGSVGVKGERGNTGPAGAPGAPGSPGAPGPVG
PLGKQGDRGESGAQGPAGPSGPAGARGMAGPQGPRGDKGESGETGERGQKGHRGFTGLQG
LPGPPGSAGDSGASGPAGPSGAKGPPGPTGPAGKDGSNGQPGPIGPPGPRGRSGETGPAG
PPGNAGPPGPPGPPGPGIDMSAFAGLGQTEKSPDPLRYMRADEASSSLRQHDVEVDSTLK
SLNNQIENLRSPDGTQKNPARTCRDLKLCHPEWKSGDYWVDPNIGSTADAIKVFCNMETG
ETCVYPSIAKVPQKNWWTSKSKDRKHVWFGETMNGGFHFSYAQDGPAANAASVQLTFLRL
LSTEASQNLTYHCKNSVAYMDQATGNLKKAVLLQGSNDVEIRAEGNSRFTYSVLEDGCKR
HTGRWGKTVFEYKTQKTSRLPIVDIAPMDIGGADQEFGVDVGAVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggactcaaggactgttctgctacttgtagcatcccaagttgtttta
ctatccgtggtcagatgtcaggaggaggacgaccaggaggcaggtggctgcatccaggac
ggccagcagtataatgataaggatgtgtggaagcccgagccgtgtcgtatctgtgtgtgc
gacagcggagcggttctgtgtgatgagataatctgcgaggagatcaaagagtgtgccaac
cctatcatcccatctggagagtgctgtcccatctgccctgctgatgccagtgcccccatt
gagacaattggcgctaagggccagaaaggtgaaccaggagacattgcagatgttgtagga
ccaaaaggaccaccaggccctatgggccccccaggtgagcagggaatacgcggagaagct
ggtgctaagggtgataagggaaatcctggacctcgaggaagagatggtgagcctggcacc
cctggaaaccctggaccctccggcccacctggaccaccagggcttggagggaactttgct
gctcagatggctggaggtttcgatgagaaggctggaggcgctcagatgggtgtgatgcaa
ggaccaatgggtcctatgggtcctcgtggtccccctggacctagtggagctcctgggcca
cagggtttccaaggtgcccctggagaggctggagagcctggtccagctggatcaatggga
cctcgtggaccacctggaccttctggaaaacctggaagcgatggtgaggctggcaaacct
ggaaaagctggtgagcgtggacctgcagggcctcagggagctcgtggattccctggaact
cctggacttcctggaatcaaaggacacagaggccatcctggtctggatggagctaaggga
gaaaatggtgctgcaggagccaagggtgagtctggttctgccggagagaacggtgcccct
ggacccatgggtccacgtggtctgcctggtgagaggggacgtcccggagctgctggagct
gcaggtgcccgtggaaatgatggcttgcccggtcctgctggtccacctgggcctgttggt
cctgctggagctcctggtttcccaggatctccaggatccaagggagaagctggtcctact
ggagcccgtggatctgaaggacaacagggaccccgcggagaggccggtaccccaggatct
cctggacctgctggagcatcgggtaaccctggtactgatggtattcctggagctaaagga
tctgctggtgcgtctggtattgctggtgctcctggattcccaggcccccgtggcccacct
ggaccacagggagctacaggacctctggggccaaagggacagtctggagaccctggtctt
cctggattcaaaggtgaagctggacccaagggagagcttggccccgctggtcctcaaggt
gcccctggccctgctggtgaagaaggaaagagaggtgccagaggagagcctggaactgct
ggaccacttggacctccaggagagagaggagctcctggtaaccgtggattcccaggtcag
gatggtcttgctggtgctaagggtgcccctggtgaccgtggtgttcctggtgctgctggg
cctaaaggtgctactggagaccctggacgcacaggagagtctggcctccccggagccaga
ggtcttactggtcgtcccggagatgctggtcctcaaggcaaagtgggaccctctggtgcc
tctggtgaggacggtcgccccggcccacctggtcctcagggagcccgtggacagccagga
gtgatgggattccctggaccaaagggagccaatggtgaacctggaaagccaggagagaag
ggtctcgtgggtcgtcctggtctgagaggtctttctggaaaagatggtgagactggtgct
tctggaccttcaggccctgctggacctgctggagagagaggagagcaaggacagcctgga
cctaatggcttccagggtctgcctggaccagctggtgccccaggagaggctggaaaacct
ggagaccagggtgtttctggagagggtggagctgctggtgctgttggacctagaggcgaa
cgtggtttccctggtgagaggggtggtgctggagctcagggtcttcagggacctcgtgga
cttcctggaacacctgggagtgatggacccaagggagctattggaccagctggtggtgct
ggatcccagggaccccctggcctgcagggtatgcccggagagagaggaaccggtggcatc
ccaggacccaagggagacagaggtgacaacggacagaaaggacctgagggagctcctgga
aaggacggtgcaagaggtttgactggtcccattggtcctcctggcccatctggacccaat
ggtgccaagggtgagactggaccctctggccctactggtgcttctggtgctcgtggtgct
cctggtgaccgtggtgagggtggtcctcctgggcctgctggatttgctggaccccctggt
gcagatggtcagcctggtgccaagggagagcttggtgagtctggacagaagggagatagt
ggtgctcctggacctcagggaccatctggggctcctggacctgtgggacctactggagta
tctggatctaaaggagcacgtggtgctcagggagctgctggtgctactggtttccctggt
gctgctggcagagttggaccacctggccctaatggtaaccctggttctgctgggccttct
ggtgctgctggtaaagacggaccaaagggagctcgtggtgatgccggcctcccaggaaga
cagggagacaatggccttcgtggacctgctggcacacaaggagagaagggagagcctgga
gaggatgggccacctggtgctgatgggccttcaggtcctcagggtctggctggatctcgt
ggtattgttggtttgcctggtcagcgtggagagagaggcttccctggtctccctggacct
tctggagaacctggtaaacaaggagcttctggttcttctggcgaccgcggacctcctgga
cctgtgggaccccctggacttactggaccttctggagaaactggaagagagggtacccct
ggatcagatggacctcctggtagagacggatcggttggagtcaagggagagcgaggtaac
actggccctgctggcgcccctggagcccccggttctcctggtgcccccggacctgtcgga
cctctcggaaaacagggagacagaggagagagtggtgctcaaggacccgcaggaccctct
ggacccgctggcgctagaggaatggctggaccccaaggaccacgtggagacaagggagag
tctggtgagactggagagaggggacagaagggtcaccgtggcttcactggtctgcagggt
cttcctggacctcctggttctgctggagattctggagcttctggacctgcaggaccaagt
ggagctaagggaccacccggaccaaccggacctgctggcaaagatggatcaaatggacag
cctggacccattggaccccccggacctcgtggacgttctggagaaactggtcctgctggt
cctcctggtaacgccgggcccccaggccctcctggtccccctggccctggcatcgacatg
tctgccttcgctggtctgggtcagactgagaagtcccctgatcctctcaggtacatgagg
gctgatgaggcctccagctccctgaggcagcacgacgtggaggtcgactccacactcaag
tccctcaacaaccagatcgagaacctgcgcagccctgacggcacccagaagaaccctgct
cgcacctgcagagacctgaaactgtgccaccctgagtggaagagcggtgactactgggtt
gatcccaacattggcagcacagctgatgccatcaaggtcttctgtaacatggagactgga
gagacctgcgtctacccaagcatcgccaaggtaccacagaagaactggtggaccagcaag
agcaaggaccgcaaacacgtctggttcggagagaccatgaatggaggattccacttcagc
tacgctcaggacggccctgctgccaacgctgccagcgtccagctgaccttcttgaggctt
ctgtccactgaagcgtcccagaatctcacttaccactgcaagaacagcgttgcctacatg
gaccaggccacaggcaatctgaagaaggctgtgctgctgcagggctccaacgatgtggag
atccgcgcagagggcaacagtcgcttcacatacagcgtgctggaggatggctgcaagaga
catacaggccggtggggcaagactgtctttgagtacaaaacacagaaaacctcccgtctg
ccaatcgtggacattgctcctatggacatcggaggagcggatcaggagtttggcgtggat
gtaggcgcagtctgcttcttgtaa
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integrated database retrieval system
