Enoplosus armatus (old wife): 139292287
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Entry
139292287 CDS
T11455
Symbol
col18a1a
Name
(RefSeq) collagen type XVIII alpha 1 chain a
KO
K06823
collagen type XVIII alpha
Organism
earm Enoplosus armatus (old wife)
Brite
KEGG Orthology (KO) [BR:
earm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
earm04147
]
139292287 (col18a1a)
00535 Proteoglycans [BR:
earm00535
]
139292287 (col18a1a)
00536 Glycosaminoglycan binding proteins [BR:
earm00536
]
139292287 (col18a1a)
Exosome [BR:
earm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139292287 (col18a1a)
Proteoglycans [BR:
earm00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
139292287 (col18a1a)
Glycosaminoglycan binding proteins [BR:
earm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139292287 (col18a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF959
DUF1554
Motif
Other DBs
NCBI-GeneID:
139292287
NCBI-ProteinID:
XP_070770665
LinkDB
All DBs
Position
11:20976098..21011452
Genome browser
AA seq
1462 aa
AA seq
DB search
MRTQFGVLFLLALWVVYSDAWFWSWTDSTTLAPTLDNEGSGSPAGSGDPPSENIAGVGAE
IIDERHGIQKVVQTWDETTEAPQLTTLILTTEPENVRASEKGTARISSRIHKPGNGTSSL
KEDSGVSLLQLIGDPPPNEITRVYGPDNSPGYVFGPDANTGQLARAHLPSPFYRDFALIF
NLKPTSDRGGVIFSVTDASQQIMYVGVKLSAVQGGNQNVILYYTEPDSQQSYEAARFLVP
SMRDTWTRFAIAVRDDKVMFYLNCDSDPRVMRIERSPDEMELEAGAGVFVGQAGGADPER
FLGVIGELRVVGDPRAAERHCEEDEDDSDMASGEGSGYEETRPPKPAVEKHRWTTTPPSS
RPIQQPPLTRKEEVSVARETASDSQHVSVESRPGLPGSPGQAGAKGEKGDQGDRGDKGDR
GPIGPKGESGSGFVSGSGSRGGARGEKGEPGEKGAKGSAGFGYLGKKGEPGPAGPPGPPG
LPGPATEFSVGGDGSVASRVPGPAGPPGGPGPQGPPGADGEPGDPGEDGKTGPDGPPGFP
GTPGDPGPKGEKGDRGEGQPGPRGPPGPPGPGLRSTFVDMEGSGFPDLEFIRGLPGPPGP
PGPPGPSTPGTAVSSGAFGPTGKDGAPGQPGLSGLPGTDGLPGVPGPKGEKGDSGELGLP
GAVGEKGAQGDSGLPGPAGESGLAGLPGPIGPVGSPGPPGPPGPSYRVGFDDMESSGAGF
TNGLPGVRGPEGRQGPPGLPGLPGKPGFPGIPGQKGNEGLVGRDGQPGLDGFPGPQGPKG
DRGDKGERGDTGRDGTGLPGPPGPPGPPGQIIYQTSSNVDGSVGSAGAQGGPGLPGQAGF
PGPIGPKGDRGDPGLPGYGVKGEKGEPGLVIGPDGNLLSLEGLTGLKGDRGPPGPVGPPG
QYGPAGLKGEIGMPGRPGRPGVNGYKGEKGDSGAGSGYGYPGVPGQPGPPGPPGPPGPAV
PLDRFNRYDETSRNYPATKGEKGERGDRGIPGIPGTASNFDIYAFKNEMKGERGDSGVKG
EKGEPGGGGYYDPRFGGVQGAPGPPGKPGLSGPKGDSVMGPSGPQGPQGPPGIGYDGRPG
PPGPPGPPGPQGSSSLPGAYRPNHSVSVPGPPGPPGPPGSPGFSSGVTVLRSYDTMIATA
RRQAEGSLIYIIDKADLYLRVRDGLRQVMLGDYSPFFRDLENEVAEVQPPPVILYPQSQD
QSHNNGAGHYSQGGSAIRPIEPPPHPPVDPRYPPQYDPRFPDPRHTGQTDGRLATQQTEN
RYPVTPPRRPSPPVPQPDSHVDTSGSGLHLIALNAPQTGNMRGIRGADFLCFQQARAIGL
KGTFRAFLSSKLQDLYTIVRRSDRDSFPIVNLKDQVLFSSWESMFGDDASKIKENVPIYS
FDGRDILRDSAWPEKMVWHGSSNKGHRQTDHYCETWRAGDRAVTGLASSLQSGHLLHQTS
SSCSGSYIVLCIENAFTSHSKK
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgaggacccagtttggagttttgtttttgttggccctatgggtggtctactctgatgct
tggttctggtcctggactgactctacaactttggccccaacattggacaatgaggggtct
ggcagtccagcaggtagtggagatccaccatcagagaatattgcaggggttggagcagag
atcattgatgagagacatgggatccaaaaggttgtgcagacatgggatgagaccactgag
gctcctcaactgaccaccctaatactgacaacagaaccggagaatgtacgtgcatcagaa
aagggaacagcacggatttcgtcacgcatacataaacctggtaatggcacatcttcactg
aaggaagacagtggagtctccctgctacagctgattggggatcctcctccaaatgagatc
acccgggtctacgggcccgacaacagccctggctacgtctttggcccggatgccaacaca
ggccagctggcccgcgcccacctgccgagcccattctaccgagacttcgctctcatcttc
aacctgaaacccacctctgacaggggcggcgtcatcttctccgtcacagatgcctcacag
cagatcatgtatgtgggtgttaaactgtcagccgtgcagggcggcaaccagaatgtcatc
ctgtactacacagagcccgactcacagcagtcatatgaggcggccaggttccttgttccc
tccatgagggatacctggactcgttttgccatcgctgtgagggatgacaaggtgatgttc
tacctcaactgtgacagcgaccctcgagtgatgcgcattgagaggtccccggacgagatg
gagctggaggcgggtgctggggtctttgttgggcaagctggaggagctgatcctgagagg
tttctgggggtgatcggagagctgagggtggtgggagacccccgtgctgctgagaggcac
tgtgaagaggatgaagatgactcagatatggcttcaggcgaaggaagcggctatgaggaa
accagacccccaaaaccagctgtggagaaacatcggtggacgactactcctccatcttcc
cggcccattcagcagccaccactgaccaggaaagaggaagtgtcagttgcaagagaaaca
gcaagtgactcccagcacgtttctgtggagtccaggcccggactacctgggtcaccagga
caagctggggctaaaggagaaaagggtgaccaaggggatagaggagacaaaggagacagg
ggtccaattgggccgaagggagaatctggctctggcttcgtctctggctccggctctcgg
ggtggagcccgtggagagaagggtgaaccaggggaaaagggagcaaagggcagtgcaggc
tttggttacctaggaaagaagggagagcccggccccgctgggccccctggtccccctggc
cttccagggcctgcgactgagttttcagtcggcggtgacggctcagttgcttccagagtt
cccggaccagctggaccaccaggcggcccagggccccagggaccaccaggagctgatgga
gagccaggtgatcctggtgaggatggaaaaactggtcctgatggacctccaggcttccca
ggaaccccaggtgaccctggacctaaaggagagaagggagaccgtggagagggtcaacct
ggccccaggggacctccaggacccccaggaccaggactcagatctacttttgtggacatg
gaaggatcagggttccctgatttggaatttattcggggtctgccaggtccccctggtccc
cctggtcctcctggtccctctacaccaggcacagcagtgagttctggggcatttggacca
acaggaaaggacggggcgcccggtcaacctggtttgtctggtttgcccggtactgatggc
ctcccaggagttcccggtcccaagggagaaaagggtgattcaggcgagctgggtcttccc
ggagctgttggagagaagggagctcaaggagactctggtttaccgggacctgcaggagag
tctggactggctggtctgcctggacccattggaccagttgggtcacctggacctcccggg
cctcctggaccaagttatcgagttggatttgatgacatggagagctctggtgcaggtttc
accaatggacttcctggcgtcagaggaccagaaggaagacagggtcctcctggcttgcct
ggacttccgggtaaaccaggcttcccgggtataccaggtcagaagggcaatgaaggtctt
gtaggaagagacgggcaaccgggtttggatggcttccctggacctcagggaccaaagggt
gacagaggtgacaaaggagagaggggtgacacaggtcgagatggaactggactcccaggt
ccacccggcccacctggcccaccaggacaaatcatctaccaaacatctagcaatgttgat
ggtagcgttggcagtgctggggctcagggaggacctggtttacctggtcaagctggattc
cctggtcctattggaccaaagggtgacagaggagaccccggccttccaggctatggagtc
aagggtgagaaaggtgagccgggtttagttatcggacctgatggaaatcttctgtctctg
gaagggctaacaggtctgaagggagacagaggacctcctggacctgttggaccccctggt
cagtacgggcctgctggattaaagggtgaaattggaatgcctggaagacctggtcgccct
ggtgtaaatggatacaagggtgagaaaggagattcaggagctggttctggctacggctac
ccaggagtccctggccaaccaggaccacccggaccacctggacctcctggcccagctgtt
cccttagatcgcttcaatcgttacgatgaaacttcaaggaattacccagcaactaaaggg
gaaaaaggggagcgtggagatcgaggaattccaggaatcccaggaacagcctctaacttt
gatatttacgcattcaagaatgaaatgaagggagagcgtggagactcgggtgtgaaggga
gaaaagggagagcctggtggtggtggctattatgacccacgttttggaggagtacaaggc
gcaccagggcctcctggcaaaccaggcctatcgggtccaaagggtgattccgtaatgggc
ccttctggaccccaggggccacaagggccaccagggattggttacgatgggcgtccaggt
cctccagggccacctggacctccaggaccccaaggatcttcctcacttcctggagcatat
aggcccaatcactctgtcagtgtccccggacctcctggtcctcctggtccacctggaagt
cccggtttctcctctggggtaacagttttgaggtcatatgatacaatgattgctactgcc
agacgccaggcagagggcagcctcatctacatcatagacaaagcagacctctatttgaga
gtacgcgatggactgcggcaagtcatgcttggagactacagccccttcttcagagatctg
gagaacgaggtggcagaggtccagcctccacctgtgatcctgtacccccagtcccaggac
cagtcccacaacaacggagctggccattactcccaggggggttctgccattcgacccatt
gaacctccaccacacccacctgtggaccccagataccctccccagtacgatcccagattc
ccagacccgagacacacaggtcagacagatggaagattagccacccagcagactgagaac
aggtaccctgtcactccgccgcgacgacccagcccacctgtaccgcagcctgatagccat
gtggacacatcaggatcaggactacacctcatcgccttgaacgcccctcagactggtaac
atgcgaggaattcgcggggcagacttcctgtgcttccagcaggcccgcgctataggcctg
aaggggaccttcagagctttcctgtcctccaagcttcaagacctctacaccatcgtccgc
aggtcggacagggacagcttccccatcgtgaacctcaaggaccaagtattgttcagcagt
tgggagtctatgtttggtgacgatgcgagcaaaattaaggagaatgtaccaatctactcc
tttgatggtagagacatcctcagggatagcgcatggccagagaaaatggtctggcatgga
tcaagcaacaaaggccacaggcaaacagaccactactgcgaaacatggcgggcgggcgac
cgtgctgtgactggtctggcatcatcgctacagagtggccacctcctgcatcaaacctcc
agtagctgctccggctcctacatcgtcctctgcattgagaacgccttcacatcacactcc
aaaaaataa
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