Enoplosus armatus (old wife): 139293893
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Entry
139293893 CDS
T11455
Symbol
msh6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
earm Enoplosus armatus (old wife)
Pathway
earm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
earm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139293893 (msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
earm03400
]
139293893 (msh6)
DNA repair and recombination proteins [BR:
earm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
139293893 (msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
139293893
NCBI-ProteinID:
XP_070771658
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Position
12:complement(15355761..15363563)
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AA seq
1379 aa
AA seq
DB search
MAKQSSLFNFFTKSPPPVSKPKPSPSPTEADLPSSVEKSNSSPKEQAKQTPQQQSAKTHK
AKPKSSSKPAKGGFNKLFGDKALTTKQSSPACTFSAGALVWAKLEGHPWWPCMVVPQPLT
GQQMRGRGRAQRIHVHFFDEPPTRGWVSTKYIREYQGSDSSDAKTGGVFFSGKPVIRHAM
ELADAVMFDSPEKRVKTPLCMDPSDEEEDEDDEEMELDKSTISDDEDSDEGEEKHEEVKS
SKVSRRSSRASTEKGNKAKRRRIIVHSDSDGSGEEFKPEHAASSSEDEEEEGTVSSEVEE
AESTQESEAESPIKPVKRKRPAEKSVSTKAKVPTTPPLAAPKRAVAADTKSRLSVFSAPD
NFESQANGSGSGGGATVWDHEKLEWLQEGRRKDSGRRRQSEDDYDPTTLFVPEDFLNRIT
PGMRRWWQLKSKMFDTVIFYKVGKFYELYHMDAVIGVNELGLTFMKGAWAHSGFPEIGFG
RFSDVLVQKGYKVARVEQTETPEMMEARCKTMAKPTKFDRVVRREVCRIITRGTQTYSVL
DGAPSESQSKYLLSLKEKAEEESSGSCRTYGVCFVDTSVGYFHVGQFPDDRHCSRLRTLI
AHYAPAEVLFEKGNPSVETRKILKASLSSALQEGLNAGNQFWDAQKTLKTLSEEDYFRES
GGKDQGTGNNFLPPLLKGMTSESDSLCLTPKEGYELALSALGGSMFYLKKCLVDQELLSM
ANFEEYVPVDVEMENAAGPASFFAQTRQRMVLDGVTLANLEIFQNGSGGTEGTLLERLDT
CSTPFGKRLLKQWLCAPVCNPTSIKDRLDAVEDLMGAQAQATEVSDLLKKLPDLERLLSK
IHSIGTPLKGQDHPDSRAVLYEEVTYSKRKIADFLSALEGFKIMQEIISVLAPVSGESQS
SLLHQVVGLKSEKEGLFPDLSAELRRWETAFDHQKARTTGVITPKAGFDPEFDQALTGVK
NCERELQDYLDRQKKRLGCKSMSFWGTGRNRYQMEVPDSVSERNIPEEYEVKSTKKGWKR
YVTKETEQLFSELQGFEEKRDAALKDCMRRLFYNFDKNYKDWKTGVECMAVLDVLLAMSR
YSQGGDGPMTRPEVVLPEADDQVAPFLDLTGSRHPCVTKTFFGDDFIPNDIYIGCPGSGD
EEKGHASCVLVTGPNMGGKSTLMRQCGLVIILAQLGCYVPAERLRFTPVDRVFTRLGASD
RIMAGESTFFVELSETASILHHATKHSVVLLDELGRGTATYDGTAIASAVVKELAEKICC
RTLFSTHYHSLVEDYANNPTVRLGHMACMVENECEDPSQETITFLYKFITGACPKSYGFN
AARLASLPEEVIQSGHRKAREFEKSTISLRLFKKLCQFAEDATLGNTHFASLVQTLNTL
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcaaagctcccttttcaatttttttacaaagtctccgcctccggtctccaag
ccgaagccgagtccctctccgaccgaggcagacctgccttcctccgtagagaagtccaac
tcctctccgaaagagcaagctaaacagacaccgcagcaacaatcagccaagacccacaaa
gctaaaccgaaaagtagctccaagcctgcgaaagggggattcaacaaactatttggtgac
aaggccctaacaaccaaacaaagcagcccagcatgcacattcagtgctggtgcccttgtg
tgggcaaaactggagggacacccctggtggccatgcatggtggtaccccaacctctgact
ggacagcagatgaggggccgtggtcgggcccagcgcatacatgtccatttctttgatgaa
cccccaactagaggatgggtcagcaccaaatatatccgagagtaccaaggctctgacagc
agcgatgctaaaacaggaggggtgttcttcagcggtaaacctgtaatccgacatgcaatg
gagctcgctgatgccgttatgttcgacagccctgaaaaaagagtaaagacgcctctctgt
atggatccgtctgatgaggaagaggatgaagatgatgaagaaatggagcttgacaagtca
acaatatcagatgacgaggatagtgatgagggtgaagagaaacatgaggaggtgaagtca
tccaaggtcagtcgacgttcatcccgtgcttcaacagaaaagggaaataaggccaagcgc
cgtcgcataattgtacactcagacagtgatggatcgggtgaggaattcaaaccagaacat
gctgcatccagcagtgaagatgaggaggaagaagggacggtgagcagtgaagtggaggaa
gcggagagcacacaagaatctgaagcagaaagccccatcaagcctgtaaagcgcaaacgt
cctgcagaaaagtctgtttctacaaaagccaaggttcctactaccccgcctttggctgca
ccaaaacgagctgttgcagccgacaccaagtctcgtttgtcagtcttctctgcccctgac
aactttgagagccaggcaaacggatcaggctctggtggaggtgccacagtttgggaccac
gagaagctggagtggttgcaggagggcaggaggaaagacagcggaaggcggcgacagtca
gaagatgactacgatcctaccaccctgttcgtgccagaagactttctaaacagaatcact
cctggtatgcgtcggtggtggcagctgaaatctaaaatgtttgatacagtcattttctac
aaggtggggaagttttatgagctctaccacatggatgctgtgatcggagtcaacgagctg
ggactaactttcatgaagggggcctgggcacactcaggttttccagagatcggctttgga
cgtttctcagacgtactggtccagaaaggctacaaggtggctcgtgtggagcagacggag
accccagagatgatggaggcacgctgtaagaccatggctaagcccacaaagtttgaccgt
gtggtgagaagagaggtgtgccggattatcacacgaggtacccaaacctacagcgtgttg
gacggcgctccctctgagagtcagagcaagtatctgctgagtttaaaggaaaaggctgaa
gaggaaagttccggtagttgccgcacctacggagtctgctttgtagacacctctgtaggt
tatttccacgtgggtcagttcccagacgatcgtcactgctcacgtctgcgcaccctgata
gcacactatgcccctgctgaagtgctctttgaaaaggggaacccatctgttgaaacccgc
aaaatacttaaggcctctctgtcctctgctctgcaggaaggacttaatgcaggcaaccag
ttctgggatgctcaaaagactcttaaaactctttcagaagaagattactttagagagtct
ggtggtaaggatcaggggacagggaacaactttcttcctcctcttctaaaagggatgacc
tctgagagcgactctctgtgcctcactcctaaagagggctatgagctggcactgtcagca
ctgggcggaagcatgttctacctgaagaaatgtctggtagaccaagagcttctctccatg
gccaactttgaagaatatgtccctgttgatgttgagatggagaacgctgctggacctgcc
agtttctttgcccagactcgtcagcggatggtccttgatggagtgactctggcaaacttg
gaaatctttcagaatgggtcaggaggaacagaagggacgctgctggagcgtttggacacc
tgctctaccccatttggcaagaggctgctgaagcagtggctctgtgctcctgtatgcaac
cccacatccatcaaggacagactggatgcagtggaagacctgatgggagctcaggcccag
gctactgaggtttcagacctgctgaagaagctcccagatttggagcgtcttctgagtaaa
atccacagcattggcactcctctgaagggccaggatcaccctgacagcagagcagttctc
tatgaggaggtcacctacagcaagcgcaagatagcagacttcctctcagcactggaaggt
ttcaaaattatgcaggagatcatttctgtcctcgctccagtttcaggcgaatctcaatcc
tcattgctccatcaagttgtcggtctgaaaagtgaaaaggaaggcctctttcccgacctg
tctgctgaactcaggcgctgggagacggccttcgaccaccagaaagcccgcactactggt
gtcataacccctaaagctggctttgacccagagtttgaccaggctctgaccggagtcaag
aactgtgagcgggagctacaggattacctggatagacagaagaagagacttggctgtaaa
agcatgtccttctggggaactgggcgaaaccgctaccagatggaggtgcctgacagtgtc
tcagagaggaatattcctgaagagtacgaggtgaagtctacaaagaaaggctggaagcgt
tatgtgacaaaggagactgaacagctgttctcagagctgcagggatttgaggagaagaga
gatgctgccctgaaagactgtatgaggaggctcttctacaactttgacaagaactacaaa
gactggaagaccggtgtggagtgcatggcagtgcttgatgtgctgctggccatgtcacgc
tacagtcagggcggagacggaccaatgaccaggccggaggtggtgctccctgaggctgat
gaccaggtagcgcccttccttgacctcactggatcccgccacccttgtgtcaccaagacc
ttttttggcgatgacttcatccctaatgacatctacatcggctgccctggtagcggtgac
gaggagaaaggtcatgcctcttgtgtccttgtcacagggccaaacatgggtggaaagtca
actctcatgagacagtgtggactcgtgatcatcctagctcagctgggctgttatgtccct
gctgagaggctgcgcttcacaccagttgacagggttttcactcgcctgggagcctcggat
cgtattatggctggagagagtactttctttgtggagctaagtgagaccgccagcatcctg
caccatgccactaaacactcagttgtgctcctggatgaattaggaaggggcacagccaca
tatgatggcacagcgattgccagtgctgttgtgaaggagcttgctgagaagatctgctgt
cgcaccctcttctccacacattaccactccctggtggaggactacgccaacaaccccact
gtgcggttgggccacatggcatgcatggtggagaatgaatgtgaggatccgagtcaagag
accatcacattcctctacaagttcatcaccggtgcttgtccaaagagttacggcttcaac
gccgctcgactcgccagcctgccagaggaggtcatccaatcaggacacaggaaggccaga
gagtttgagaagagcaccattagcctccgacttttcaagaagctctgccagtttgctgaa
gatgctacactgggcaacacacactttgcttcacttgttcagacgctcaacaccctgtag
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