Enoplosus armatus (old wife): 139296135
Help
Entry
139296135 CDS
T11455
Name
(RefSeq) regulator of nonsense transcripts 1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
earm Enoplosus armatus (old wife)
Pathway
earm03013
Nucleocytoplasmic transport
earm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
earm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139296135
03015 mRNA surveillance pathway
139296135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
earm03019
]
139296135
Enzymes [BR:
earm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
139296135
5.6.2.5 RNA 5'-3' helicase
139296135
Messenger RNA biogenesis [BR:
earm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
139296135
mRNA cycle factors
Common to processing body (P body) and stress granule
139296135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
ATPase
NPHP3_N
nSTAND3
NAT10_TcmA_helicase
DEAD
SRP54
UvrD-helicase
AAA_16
UvrD_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
139296135
NCBI-ProteinID:
XP_070774555
LinkDB
All DBs
Position
14:complement(15867335..15879357)
Genome browser
AA seq
1110 aa
AA seq
DB search
MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEYDFTDFTLPSQTQTQGQTQSQLDNQVNG
PDGVLQNGDDPVVKASQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVYCNTSK
KWFCNGRGNTSGSHIVNHLVRAKSKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKA
DSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQIAAQQ
INKLEELWKENPTATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLK
ESQTQDNITVRWDLGLNKKRIAYFSLPKTDSDMRLMQGDEICLRYKGDLAPPWKGIGHVI
KVPDNYGDEIAIELRSSAGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYI
YHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVT
SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLAL
HNQTRNMDSMPELQKLQQLKDETGELSSSDEKRYRALRRTAERELLMNADVICCTCVGAG
DPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLS
QSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQ
PDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRS
YLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNV
ALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVN
TINPGGRFMSTAMYDAREALIPGSVYDRSSNGRTSNMYFQTHDQIGMIGTGPSPMTSMNI
PIPFNLVMPPIPPPGYMGQVNGPTSGRGGGMKGKAGGGGGGGARGGRQRNRGNMGNHSGG
NGGDRSHMSGSQASQDLGSQPFSQGPLTQGYINMSQPSQMSQPGLSQPELSQDSYLGDEF
KSQIDVALSQDSTYQGERAYQHGVTGLSQY
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgaggcgtacgggccgagctcgcagactctaacgttcctcgacaccgaggaa
gccgagctgctgggagcggacacccagggctccgagtacgacttcaccgattttaccctg
ccgagccagacccagacccaaggccaaacccagagtcagctcgacaaccaggttaatggc
cctgacggggtgctacagaatggagacgaccctgtggtgaaagccagtcagctgctggca
gagttgaactttgaggaggatgaggaggacacctactacaccaaggatctgcctgtacat
gcctgcagttactgtgggattcatgatccagcctgtgtggtctactgcaacaccagcaag
aagtggttttgtaatggccgtggaaacacatcaggcagccacattgtaaaccacctggtg
agagcaaagtccaaggaggtgaccctgcacaaagatggccctctgggggaaacagtactg
gagtgctacaactgtggctgtcgcaatgtcttccttctgggcttcatccctgccaaagct
gactcagttgtggtgttactgtgcaggcagccatgtgccagccagagcagcctgaaggac
atcaactgggacagctcacagtggcagcctctcatccaggaccgctgcttcctgtcctgg
ctggtcaaaatcccttcagagcaggagcagctcagggctcgtcagatcgctgcccagcag
atcaacaaactggaggaactctggaaggaaaatcctactgcaaccttggaggacctggag
aagcctggtgtggatgaggagccccaacatgtgctgctccgctatgaggatgcctaccag
taccagaacatctttggtcctcttgtgaagctggaggccgactacgataagaaactcaaa
gagtcccagactcaagacaacatcacggtcagatgggacttgggcctgaataaaaagagg
attgcttatttctctcttcccaagacagactcagacatgcgactgatgcagggagatgaa
atttgcctgaggtacaaaggagacctggctcctccgtggaaaggcattggacatgtcatc
aaagtccctgataactacggtgacgagattgccatagagctaaggagcagtgccggggct
ccagtggagatcccacacaattttcaggttgactttgtgtggaaatccacttcctttgac
aggatgcagagtgccctgaagacgtttgctgtggatgagacttcagtgtctggttacatc
taccacaaactgctgggacatgaggtagaggatgttgtcatcaagtgccagctgcctaaa
cgcttcaccgctcaaggcctgccagaccttaaccactcacaggtgtatgctgtgaagacg
gtgctacagcgtcccctcagtctgatccagggtcctcctggcacagggaagactgtaacc
tctgcgactattgtctaccacctggctagacagggcaacgggccagtgctggtgtgtgct
cccagtaacattgccgtcgaccagctgacagagaagatccaccagacaggcctcaaggtg
gtgaggctttgtgccaagagcagggaggccatcgactcacccgtgtccttcctggctctg
cacaaccagacccgtaacatggacagtatgccagaacttcagaaactccaacagctgaag
gacgagactggagagctgtcttcttcagacgagaagcgctacagagcactgagacgcact
gctgagagagagctgcttatgaatgccgatgtgatctgctgtacctgtgttggggcgggg
gatcctcgtctagccaaaatgcagttccgctcaatcctgattgatgaaagcacccaggcc
accgaaccagagtgcatggtgcctgtcgtcctgggggccaaacagttgattctggtgggt
gatcactgccagctgggccctgtggtgatgtgtaagaaggcagctaaagcaggtctgtcc
caatctctgttcgagcgcctggtagttttggggatccggccaatccgtctgcaggtccag
taccgcatgcatccggccctcagcgccttcccctccaacatcttctacgagggctctctg
cagaacggagtcactgccgcggaccgtgtgaagaaaggctttgacttccagtggccgcag
cccgacaagcccatgttcttttacgtcacccaaggccaagaggaaattgccagctctgga
acgtcctatctcaacaggactgaggcagcaaatgtggagaaaataaccacaaggttgctg
aaggctggagcgaagcctgatcagattggcatcattacgccctacgagggacagaggtcc
tacctggtccagtacatgcagttcagtggctccctccacaccaaactctaccaggaggtg
gaaatagccagtgtggacgcctttcaaggcagagagaaggacttcatcatcctgtcctgt
gtgagggccaatgagcaccagggcatcggcttcctcaatgatcccagacgtctcaatgtg
gcactcactagggccaggtatggtgtgatcattgtgggaaaccccaaggccctgtccaag
cagcctctgtggaaccacctgttgaactactacaaggagcagaaggtcctggtcgaaggc
ccccttaacaacctgagggaaagcctcatgcaattcagcaagccccgcaagctagtcaac
acaatcaaccctgggggtcgattcatgagcacggccatgtatgatgccagggaggccctc
attcctggatctgtgtatgaccgcagcagcaacggacgcacgtccaacatgtatttccag
acccatgaccagattggtatgattggcacaggacctagtcccatgacttccatgaacatc
cccatcccgttcaacctcgtgatgcctcccattcctccacctgggtacatgggacaagtc
aatggacccacgtccggtcgtggtggaggtatgaaaggcaaggcaggcggtggaggaggc
ggtggggctcgaggcggccgtcaaagaaaccgcggcaacatggggaatcacagtggaggg
aatggaggagaccgcagccacatgagtggcagccaggccagccaggacctgggctcccag
cccttctcccaggggcctctgacgcagggctacatcaacatgagccagccgtcacagatg
agccagcctgggctctcccagcctgaactgtcacaggacagttacctaggagacgagttc
aagtcccagattgacgtggctttgtcccaggactccacctaccagggggagcgggcctac
caacacggtgtgactggactgtcccagtactag
DBGET
integrated database retrieval system
