Enoplosus armatus (old wife): 139296377
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Entry
139296377 CDS
T11455
Symbol
lig1
Name
(RefSeq) DNA ligase 1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
earm Enoplosus armatus (old wife)
Pathway
earm03030
DNA replication
earm03410
Base excision repair
earm03420
Nucleotide excision repair
earm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
earm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139296377 (lig1)
03410 Base excision repair
139296377 (lig1)
03420 Nucleotide excision repair
139296377 (lig1)
03430 Mismatch repair
139296377 (lig1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
earm03032
]
139296377 (lig1)
03400 DNA repair and recombination proteins [BR:
earm03400
]
139296377 (lig1)
Enzymes [BR:
earm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
139296377 (lig1)
6.5.1.6 DNA ligase (ATP or NAD+)
139296377 (lig1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
139296377 (lig1)
DNA replication proteins [BR:
earm03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
139296377 (lig1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
139296377 (lig1)
DNA repair and recombination proteins [BR:
earm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
139296377 (lig1)
NER (nucleotide excision repair)
Other NER factors
139296377 (lig1)
MMR (mismatch excision repair)
Other MMR factors
139296377 (lig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
139296377
NCBI-ProteinID:
XP_070774867
LinkDB
All DBs
Position
14:4765036..4805891
Genome browser
AA seq
1010 aa
AA seq
DB search
MQRSIASFFQPKSKDKDVQKKTSDETVKKPAKSPLKVQNGVREAESPIKKVAKRSRQILD
SDDDEAPVVKEQVATKGQGDKEALGKTEKKDDVFKAVPTPLSPPPAPATPVTPATPATPA
SSASPGTPNTPNSISPSGMVKRKTARKMFPKRKLDESRSGGESQKEEAEEEQGQQNKRPR
VESSASSTGNTDEPMEEGAKEERVEKAVTDANRPDEEVENKNKEEGEEAKEEERVERKSS
DEEEKKAEGAVKKNEAKEKTDDEKGPAIATKEVVEKDTREGEESPKSQTAKKQKEAKEQK
DKELPKKAPISSFFAPRKATVKTEKQEKTEGEKKTSAERKTSAEESKDTKGESTPGQTDY
DPSGANYHPVDHACWKQGQKVPYLAVARTFEKIEDDSGRLRNIETLSNLFRSVLLLSPDD
LLCCVYLCLNQLGPAHLGMELGVGETVLMKAVAQATGRQLDKIKAEAQEKGDLGLVAESS
RSNQRMMFQPASLTAGGVFRKLKEIASMSGNSAMNKKIDIIKGLFVACRFSEARYIVRSL
AGKLRIGLAEQSVLSALSQAVCLTPPGQGFPPAVIDAGKGMSAESRRAWIEEKSLILKQT
YCEMPNYDVLIPVLLKEGIDQLPNHCKLTPGVPLRPMLAHPTKGVGEVMKRFDEAAFTCE
YKYDGERAQIHILESGEVRIFSRNQEDNTSKYPDIISRIPKVKKDSVVCCVLDAEAVAWD
REKKQIQSFQVLTTRKRKDVDASEIKVQVCVYAFDLLYLNGESLVRQPLCRRRALLKESF
SEVEGEFVFARSIDSDNTDTIAEFLEQSVRDSCEGLMVKTLEKDATYEIAKRSHNWLKLK
KDYLEGVGDTMDLCVIGAYLGKGKRTGTYGGFLLACYDDENEEFQSVCKIGTGFKDEDLE
QHYKFLKEHILPKPRAYYRVDQSAEPDVWLDAVQVWEVKCADLSLSPVYKAAMGMVDPEK
GISLRFPRFLRIRDDKKPEDATTGAQIADLYKKQQQIQNQGEKADLEDYY
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggagcatcgcatctttctttcagcccaagagcaaggacaaggatgttcagaag
aaaacctcagatgaaacagtgaaaaaacctgccaaaagtcctctcaaggtgcagaacggt
gtccgggaggctgagtcacccatcaagaaggttgccaaacgcagccgtcagatcctggac
agcgacgatgacgaggcaccggtcgtgaaagaacaagtcgccaccaagggacaaggagac
aaagaagctcttggtaaaacagaaaagaaggatgatgtgtttaaggcagttcccacgccc
ctgtctcctcctcctgccccagctacacctgtaaccccagccactccagccaccccggcc
tcttctgcatcacctgggacccccaacaccccaaactccatctccccctctgggatggtt
aaacgcaagactgcaaggaagatgttccccaagaggaagcttgatgagagcaggagcggc
ggtgagagtcagaaagaggaggcagaggaggagcagggtcagcaaaacaaacgaccccgt
gtggagagcagtgccagcagcacaggaaacacagatgaacccatggaggagggagcaaag
gaagaaagagttgaaaaggcagtgaccgacgctaaccgcccagatgaggaggtggagaac
aagaacaaagaggaaggagaggaggccaaggaggaggagcgggtggagaggaagagctct
gatgaggaagaaaagaaagctgagggggcggtaaagaaaaatgaggcaaaggagaagaca
gatgatgagaaagggcctgctattgccacgaaggaggtggttgaaaaggacacgcgagag
ggagaagagagcccaaaaagtcaaacggcgaaaaagcagaaagaagcaaaagagcagaaa
gataaggagctgcccaagaaagcccccatcagcagtttctttgctcccagaaaagcaaca
gtgaagacggagaaacaagagaagactgaaggagagaagaagacgagtgcagagaggaag
acttcagcggaggagagcaaagacactaaaggtgagtcaacgcccggacaaacggactac
gatccgtctggggctaactaccatcctgtggaccacgcctgctggaagcagggccagaaa
gtgccgtacttggctgtggctcgcacctttgagaagattgaagacgactctggcagactg
agaaacatcgagacgctgtcgaacctgtttcgctccgtgctgctgctctctccagatgac
ctgctgtgctgtgtgtacctgtgtttgaaccagctgggtcctgcccacctggggatggag
cttggcgttggagagacggtgctgatgaaagctgttgctcaagcaactgggcgacaattg
gacaaaatcaaggcagaggcgcaggagaaaggagatttgggccttgtggccgagagttcc
cgtagcaaccagcgcatgatgttccaaccggccagcctgacagcagggggcgtgttcagg
aaattgaaggaaatcgccagcatgagtgggaactcggccatgaataagaaaatcgacatc
atcaaaggcctctttgtggcatgccgcttttccgaggcccgctacatagtcaggtccctg
gctgggaagctgaggataggcctggctgagcagagtgtcctatcagcactaagccaggct
gtgtgcctaaccccccctggacaaggtttccctcccgctgtgatcgacgcagggaaggga
atgagcgctgagagcaggcgggcctggatcgaagagaagagtctcattctcaaacagact
tactgcgagatgcccaattacgacgtcctcatccctgttctgctgaaagagggcatagac
cagctacccaatcactgcaagctcactccaggtgtgccgctgagacccatgttggctcac
ccaaccaagggtgtcggcgaggtgatgaagaggtttgacgaggcggcattcacctgcgag
tataaatacgacggagagcgtgcacagattcacattctggagagtggtgaggttcgaata
ttcagccgcaaccaggaagacaacaccagcaaataccccgatatcatctctcgcattccc
aaggtgaagaaggactctgtggtatgctgcgtcctggacgcagaggcagtggcctgggat
cgtgagaagaaacagatccagtcctttcaggtcctcaccactcgtaagagaaaggacgtg
gatgcctcagagatcaaagtccaagtgtgtgtgtacgcctttgacctcctctatcttaac
ggcgagtccctggtgcgacagccgttgtgtcggcgtcgggctctcctgaaagaaagcttc
tcagaggtggagggagagtttgtgtttgcccgatccatcgactccgacaacaccgacacc
atcgccgagttcctggagcagtctgtccgagactcctgcgagggcctaatggtgaagact
ctggagaaggatgccacctatgaaatcgccaagcgctctcataactggctcaagctgaag
aaggactacctggagggggtgggcgacacaatggacctgtgtgtgattggcgcctacctg
ggaaaaggcaagaggacgggcacctatgggggcttcctgctggcctgctacgacgacgag
aacgaggagttccagtccgtctgcaagatcgggacaggcttcaaggatgaagatctggag
cagcattacaagttcttaaaggagcacatcctgcccaagccccgtgcctactaccgtgtc
gaccaatcggcagagcccgacgtgtggctggacgccgtgcaggtttgggaggtgaagtgc
gccgacctgtcgctgtcgcctgtctacaaggctgccatgggaatggtggatccagaaaag
ggcatctctctgaggttcccccgcttccttcggatcagagacgacaagaagcctgaggac
gccacgacaggagctcagatcgctgatttgtacaagaagcagcagcagattcagaatcag
ggggagaaagctgacctggaggactactactga
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